Gene Swit_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3002 
Symbol 
ID5196889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3289418 
End bp3289687 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content66% 
IMG OID640582551 
Producthypothetical protein 
Protein accessionYP_001263491 
Protein GI148555909 
COG category[S] Function unknown 
COG ID[COG5454] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA GCTCGATCGT CGCGATCTAC CTGCTTTTCT GGTGGGGCTG CCTGTTCCTG 
GTGCTGCCCT TCCGGCTGCG CAGCAGCGCC GAGCCCGAGG CGCTCGTCCC CGGCCAGGCC
GAAAGCGCCC CGCCGCGCTT CTCGGTGTGG CGGACGGTGC TGTGGACGAC GATCGTCTCG
CTGGTCGTGT TCGGGCTGTT CTACGTCAAC TATCTCAACG GCTGGATCAC CGCCGACTTC
TTCGATCTGA CCCGGTTCCG CGACGCCTGA
 
Protein sequence
MKLSSIVAIY LLFWWGCLFL VLPFRLRSSA EPEALVPGQA ESAPPRFSVW RTVLWTTIVS 
LVVFGLFYVN YLNGWITADF FDLTRFRDA