Gene Swit_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2975 
Symbol 
ID5200602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3260437 
End bp3261414 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content73% 
IMG OID640582524 
ProductCitryl-CoA lyase 
Protein accessionYP_001263464 
Protein GI148555882 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.3261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGGA GGGGGACCAC CCGCAGGGTG GTGGAGGGGG CGACGGCGCA GCCGGCGCTG 
ACGCGCTGCC CTTCCACCGC TTCGCGGTCC CCCTCCCCGT TCCGGGGAGG AATGAGAGGG
GAGCCCATGA CGATCCGCCC GCGCCGCAGC GCGCTCTACA TGCCCGCCTC GAACCTGCGC
GCGATCGACA AGGCGCGGTC GCTGCCCTGC GACGTGGTGA TCTTCGACCT CGAGGACGCG
GTCGCGCCCG AGGCCAAGGC CGAGGCGCGC GCCAATGCGG TGGCGGCGGT GCGCGACGGC
GGGTTCGGGA AGCGCGAGCT GGTGATTCGG GTCAATGCGC TCGGCACCCC CTGGGCCGAG
GACGACCTTG CCGCGGCGGC ATCGTCGGGC GCCGACGCGA TCCTCGCCCC CAAGGTCGGC
GATGCGGACA GCGTGCGCCG CTATCATGCG GCGATCGCGG CGGCCCCGGC GGCGACGGGC
TTCTGGGCGA TGGTCGAGAC CACCCGGGCG ATCTTCCGGC TCGATGCGAT CGCCGAGGCG
ATGAGCGCCC GCCCGGCGGC GTTCGTGCTC GGCACCAACG ACCTCGCCAA GGAGATGGGC
GCGCGCCTCA CCGTCGAGCG GACGCCGTTC CTCGGCATGA TGGCGATGGC GGTCGCGGCG
GCGAAGGGCC ATGGCCTCGC CATCCTCGAC GGCGTCTACA ACGCGTTCGA CGACGAGGCC
GGCCTCGACC GGCAATGCGC CGAGGCGAAG GCCTATGGCT TCGACGGCAA GACGCTGATC
CATCCGCGCC AGATCGATCC GACCAACCGG GCGTTCAGCC CCGACGCGGC GGAGATCGCC
TGGGCGCGCG CCGCGGTCGA CGGCTTCGCC GCGCCCGAAA ATGCCGGCAA GGGGGCGATC
AGGGTCGGCG GAGAGATGGT CGAGCGGCTG CACCTCGACC AGGCGCACGC GATCCTGGCG
ATGGCCGGGG ACGCGTAG
 
Protein sequence
MQGRGTTRRV VEGATAQPAL TRCPSTASRS PSPFRGGMRG EPMTIRPRRS ALYMPASNLR 
AIDKARSLPC DVVIFDLEDA VAPEAKAEAR ANAVAAVRDG GFGKRELVIR VNALGTPWAE
DDLAAAASSG ADAILAPKVG DADSVRRYHA AIAAAPAATG FWAMVETTRA IFRLDAIAEA
MSARPAAFVL GTNDLAKEMG ARLTVERTPF LGMMAMAVAA AKGHGLAILD GVYNAFDDEA
GLDRQCAEAK AYGFDGKTLI HPRQIDPTNR AFSPDAAEIA WARAAVDGFA APENAGKGAI
RVGGEMVERL HLDQAHAILA MAGDA