Gene Swit_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2970 
Symbol 
ID5200714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3254157 
End bp3255374 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID640582519 
Productargininosuccinate synthase 
Protein accessionYP_001263459 
Protein GI148555877 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0698642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG TGAAGCGGGT GGTGCTGGCC TTCTCGGGGG GGCTCGACAC GAGCGTGATC 
CTGAAATGGC TGCAGCAGAC CTACCAGTGC GAGGTCGTCA CCTTCACCGC CGACCTCGGC
CAGGGCGAGG AGCTGGAGCC CGCGCGCGCC AAGGCGAAGC TGATGGGCGT GCCCGACGAG
CACATCTTCA TCGACGACCT CCGCGAGGAG TTCGTCAAGG ACTATGTCTT CCCGATGATG
CGCGGCAACG CGCTCTACGA GGGGCTCTAC CTGCTCGGCA CCTCGATCGC CCGGCCGCTG
ATCGCCAAGC GCCAGATCGA GATCGCGAGG GCGGTCGGCG CCGACGCGGT CAGCCATGGC
GCGACCGGCA AGGGCAACGA CCAGGTCCGC TTCGAGCTGG GCTATTACGG CCTCGCCCCC
GACATCCGCG TGATCGCGCC GTGGCGCGAG TGGGACCTGA CCAGCCGCAC CGCGCTGATC
GACTTCGCCG AGAAGCACCA GATCCCGGTC CCCAAGGACA AGCGCGGCGA ATCGCCCTTC
TCGACCGACG CGAACCTTCT CCACACCTCG TCCGAGGGCA AGGTGCTCGA GGACCCGTGG
GAGGAGGTGC CCGACTATGT CTATTCGCGC ACCGTCAACC CGGAGGACGC CCCCGACCAG
CCCGAGATCA TCACCATCGA CTTCGAGCGC GGCGACGGCG TCGCGCTGAA CGGCGAGGGG
ATGAGCCCGG CGACGCTGCT GACCGCGCTC AACGAGCTCG GCCGCAAGCA CGGCATCGGC
CGGCTCGACC TGGTGGAGAA CCGCTTCGTC GGCATGAAGT CGCGCGGCAT GTACGAGACG
CCGGGCGGCG CCATCTACCA CCTCGCCCAT CGCGGCATCG AGCAGATCAC CCTCGATCGC
GGCGCCGCGC ACCTCAAGGA CGAGCTGGCG CCTCGCTATG CCGAGCTGAT CTACAACGGC
TTCTGGTTCT CGCCCGAGCG CGAGATGCTC CAGGCCGCGA TCGACCACAG CCAGGAGAAG
GTGACCGGCA CCGTCCGGCT CAAGCTCTAC AAGGGCGGGG TCCATGTGAT CGGCCGCAAG
TCGCCCTACA CGCTCTATTC GGAGAAGGTC GTCACCTTCG AGGACGACGC GGGCGCCTAT
GACCAGCGCG ACGCGGCGGG CTTCATCAAG CTCAACGCGC TGCGCCTCCG CCTGCTCGGC
CGCCGCGACG GGCGGTAG
 
Protein sequence
MSDVKRVVLA FSGGLDTSVI LKWLQQTYQC EVVTFTADLG QGEELEPARA KAKLMGVPDE 
HIFIDDLREE FVKDYVFPMM RGNALYEGLY LLGTSIARPL IAKRQIEIAR AVGADAVSHG
ATGKGNDQVR FELGYYGLAP DIRVIAPWRE WDLTSRTALI DFAEKHQIPV PKDKRGESPF
STDANLLHTS SEGKVLEDPW EEVPDYVYSR TVNPEDAPDQ PEIITIDFER GDGVALNGEG
MSPATLLTAL NELGRKHGIG RLDLVENRFV GMKSRGMYET PGGAIYHLAH RGIEQITLDR
GAAHLKDELA PRYAELIYNG FWFSPEREML QAAIDHSQEK VTGTVRLKLY KGGVHVIGRK
SPYTLYSEKV VTFEDDAGAY DQRDAAGFIK LNALRLRLLG RRDGR