Gene Swit_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2947 
Symbol 
ID5198522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3230374 
End bp3230745 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content71% 
IMG OID640582497 
Productresponse regulator receiver protein 
Protein accessionYP_001263437 
Protein GI148555855 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.386371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0170157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTA TCCTGTGCGT CGACGACGAT GGGCTCGTCC TCTCCATCAC CTCGGATCTG 
CTGCGCGCGC TCGGCCATGA TGTGGTCGAG GCGATCGGGG GCGCCCCGGC GACGCGGACG
ATCGAGGGGG ACGGCGATTT CGACCTGCTC GTCACCGACA TCCACATGCC CGGCGGCCCC
GGCGGCCCGG ACCTCGCCCA GCTCGCGCGC CGCACCCATC CCGAACTGCC GGTGATCTTC
TTCAGCGGCG TCGACCAGTT CACCCCCGCC CAGCCCGGCG ACCAGGTGCT GCGCAAGCCC
TGCACGCTCG GCGAGCTGCA GCAGGCGATC GCGATGGCCG TCCCGCCGCG ATCGCGGATG
GCGTCGCTCT GA
 
Protein sequence
MLRILCVDDD GLVLSITSDL LRALGHDVVE AIGGAPATRT IEGDGDFDLL VTDIHMPGGP 
GGPDLAQLAR RTHPELPVIF FSGVDQFTPA QPGDQVLRKP CTLGELQQAI AMAVPPRSRM
ASL