| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2939 |
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| Symbol | |
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| ID | 5199567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3226685 |
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| End bp | 3227065 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582489 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_001263429 |
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| Protein GI | 148555847 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02978] phage shock protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.788518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0375672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGCTC GTCGCACCAA ATTCTACCTC GACAAGCGCA ACCGCAAATG GCTCGGCGTC
TGCGCCGGAC TGGCCGACTA TACCGGCATC GACGTCACCC TGATCCGGGT CGGCGTGGTG
ATCCTGACCT TCGTCACCTT TCCCTGGGCG CTGGTCGCCT ATCTGGTGGT GAACTGGCTG
GCCAACGACA AGCCGGGCGA GTTCTACGGC ACCAGCCGCG AGGACGAGAA ATTCTGGCAG
TCGGTCCGCG CCCGGCCCGG CGCCTCGGTC CGCGACGTCC GCGCCCGGTT CCGCGACATC
GATCGCCGCA TTGCCGACAT CGAGGCGCAC GTGACCAGCC ACAACTCGGC TCTCGCCCGC
GAAATCGACG CTCTGCGCTG A
|
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| Protein sequence | MSARRTKFYL DKRNRKWLGV CAGLADYTGI DVTLIRVGVV ILTFVTFPWA LVAYLVVNWL
ANDKPGEFYG TSREDEKFWQ SVRARPGASV RDVRARFRDI DRRIADIEAH VTSHNSALAR
EIDALR
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