Gene Swit_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2933 
Symbol 
ID5196157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3221948 
End bp3222580 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID640582483 
Productsuperoxide dismutase 
Protein accessionYP_001263423 
Protein GI148555841 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.417891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTT CGCTTCCCCC GCTGCCGTTC GATCGCGCCG CCCTCGAACC GGTGCTGTCC 
GCCGAGAGCT TCGACTATCA TCATGGCAAG CACCACAAGG CCTATGTCGA CAAGGTCAAC
GGCTGGATCG AGGAGAAGGG CCTCGAAGGC AAGTCGCTGG TCGAGGTGAT CCGCCTCGCC
AAGGACCGCG ACGACAAGGG CCTCGCCAAC CAGGCCGGCC AGATCTGGAA CCACGACTTC
TTCTGGCAGG GCCTCGCGCC CGAAGGCTCG ACCAAGCCGT CCGACAAGCT CGCCAAGCTG
ATCGAGGCGA GCTTCGGCAG CCAGGACGGG CTGGTCGAGA AGATGGCCGA GGCCGCCGTC
GGCCATTTCG GCAGCGGCTG GGCCTGGCTG GTGCTTGCCG GCGACGCGCT CAAGGTCACC
TCGCTCCACG ACGGCGAGAC CCCGCTGGCG CTCGACACCG TCAAGCCGCT GCTGACGCTC
GATGTGTGGG AGCATGCCTA TTATATCGAC TATCGCAACG AGCGCCCGCG CTTCGCCAAG
ACCGTGCTCG GCAAGGTCGT GAACTGGGAC TTCGTGTCGC AGAACATCGA GCAGGACTCG
ATCGCCAAGG CCGACCAGCT GGTCGACGCC TAA
 
Protein sequence
MAFSLPPLPF DRAALEPVLS AESFDYHHGK HHKAYVDKVN GWIEEKGLEG KSLVEVIRLA 
KDRDDKGLAN QAGQIWNHDF FWQGLAPEGS TKPSDKLAKL IEASFGSQDG LVEKMAEAAV
GHFGSGWAWL VLAGDALKVT SLHDGETPLA LDTVKPLLTL DVWEHAYYID YRNERPRFAK
TVLGKVVNWD FVSQNIEQDS IAKADQLVDA