Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2933 |
Symbol | |
ID | 5196157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3221948 |
End bp | 3222580 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640582483 |
Product | superoxide dismutase |
Protein accession | YP_001263423 |
Protein GI | 148555841 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.417891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTTT CGCTTCCCCC GCTGCCGTTC GATCGCGCCG CCCTCGAACC GGTGCTGTCC GCCGAGAGCT TCGACTATCA TCATGGCAAG CACCACAAGG CCTATGTCGA CAAGGTCAAC GGCTGGATCG AGGAGAAGGG CCTCGAAGGC AAGTCGCTGG TCGAGGTGAT CCGCCTCGCC AAGGACCGCG ACGACAAGGG CCTCGCCAAC CAGGCCGGCC AGATCTGGAA CCACGACTTC TTCTGGCAGG GCCTCGCGCC CGAAGGCTCG ACCAAGCCGT CCGACAAGCT CGCCAAGCTG ATCGAGGCGA GCTTCGGCAG CCAGGACGGG CTGGTCGAGA AGATGGCCGA GGCCGCCGTC GGCCATTTCG GCAGCGGCTG GGCCTGGCTG GTGCTTGCCG GCGACGCGCT CAAGGTCACC TCGCTCCACG ACGGCGAGAC CCCGCTGGCG CTCGACACCG TCAAGCCGCT GCTGACGCTC GATGTGTGGG AGCATGCCTA TTATATCGAC TATCGCAACG AGCGCCCGCG CTTCGCCAAG ACCGTGCTCG GCAAGGTCGT GAACTGGGAC TTCGTGTCGC AGAACATCGA GCAGGACTCG ATCGCCAAGG CCGACCAGCT GGTCGACGCC TAA
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Protein sequence | MAFSLPPLPF DRAALEPVLS AESFDYHHGK HHKAYVDKVN GWIEEKGLEG KSLVEVIRLA KDRDDKGLAN QAGQIWNHDF FWQGLAPEGS TKPSDKLAKL IEASFGSQDG LVEKMAEAAV GHFGSGWAWL VLAGDALKVT SLHDGETPLA LDTVKPLLTL DVWEHAYYID YRNERPRFAK TVLGKVVNWD FVSQNIEQDS IAKADQLVDA
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