| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2885 |
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| Symbol | |
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| ID | 5199248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3168588 |
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| End bp | 3170609 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640582435 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263375 |
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| Protein GI | 148555793 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.549497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.159782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCATC TTCGTTTCCT GCTGACCGCG GCCTGCGTCG GGCTCATCGC CGGCCCGGCC
TGGGCCGACG ATGCGGCGGA GATCGTCGTC ACCGGCCAGG GCCTGCCACG CTCGCCCGGC
GACGCCGCGT TCGACGTGAT CAGCATCGAC CGCGCCCGGC TGGAGGCGTC GGCGAGCGGG
CGGATGGAGG ACATCCTGCG CGACGCCGCC GGCTTCCAGC AATTCCGCCG TTCCGACGCG
CGATCGGCGC ATCCGACCAG CCAGGGGGCG ACGCTGCGCG GCCTCGGCGG CAACGCCTCG
ACCCGCGCGC TGATCCTGCT CGACGGCGTG CCGATGGTCG ATCCGTTCGG CGGCTGGGTG
AGCTGGGCCG CGCTCGATCC GGCGCGGATC GGCCATGTCC GCGTCACGCG CGGCGGCGGC
AGCGGCGTCT ATGGCCCCGG CGCGCTGGCC GGGACGATCG AGCTGTCGAG CATGAGCCCG
GACGAGGCGC ACGCCGTCGA CGCGAGCGTC GCCTATGGCA GCCGCGACTC GATCGACGCC
GACGCGACGG TGACGGCGCG GCTCGGCGGC GGCTTCCTGA TGCTGTCGGG CGGCCATGCG
CAGGGCGACG GCTTCATCCC CGTCGTCGAG GAGGATCGCG GCCCGATCGA CCGCGCCGCG
CGCTACAAGC AGAGCCGCGC CGCCGCCCGC GCGGTGATCC CGGTCGGCGC TGAGACCGAG
CTGCAGGCCA ACGGCTCCTT CCTGCTCGAC CGGCGCGACC GCGGCGTCCC CTTCACCGGC
AACAGCAACC TCGCGGTCGA CAGCTCGATC CGGCTGGTCG GGCGCGGCCG CTGGGGGTGG
GAGGCGACCG CCTGGCTCCA GCACCGCGAA TTCTCGAGCG GCTTCGCCAG CATCGGCGCC
GGCCGCGCCA CCGTCAGCCA GTCGCTCGAC CAGTATAACG TCCCCGCCAA CGGCTTCGGC
GGGCGGATCG AGCTGCGCCC GCCGCTCGGC GAAGGGATCA GCCTGCGGAT CGGCGGCGAC
GCCCGCCATG TCAACGGACG CACCGAGGAA CGCGTCGTCT CGACCAACGC CAACCGCGTC
GCGGGCGGCG AGCAGAATGT CTTCGGCGGC TTCGCCGAAC TGGCGCTGCT GCCCGCCACG
GGGCTGACGC TGACCGCGAG CGGCCGGGTC GACCATTGGC AGCTCCGCGA CGGCCAGCGC
ACCGAGATCA GCCGCGCGAC CGGCGCCCTG ATCGCCGCCA ACAGCGCGCG CTATCCCGAC
CGGTCGGGGA CCGAGGCGAC CGGCCGCGCC GGCATCGCCT GGAGCCCGCC GGGCGCGGCG
GCGGTCAGCC TGCGCGCGGC GGCCTATACC GGCTGGCGCC TGCCGACCCT CAACGAGCTC
TACCGCCCGT TCCGCGCGGG CAATGATTCG ACCATCGCCA ACCCGCTGCT CGATCCCGAG
CGGGTCAAGG GGATCGAGGG CGGCGCCGAA TATGCGCCGC TGCCCGGATG GAAGCTGGGG
GCGACGATCT TCTGGAACCG GCTCGACGAC GCGATCTCGA ACGTCACCAT CGCGCCCAAC
ACCCGCCAGC GCCAGAATGT CGACGCGATC CGCAGCCGCG GCATCGAGGT CGACGGCATG
GCGACGCTGG GCGAGTGGCG CGCGATCGCC AGCTATTCGC ACATCGACCC GCGCGTCCGC
GCGTCCGGCG CGGCGCTCGG CCTCGCCGGC CTGCGCCCCG CCCAGACGCC GCGCGACCAG
GCGAGCGCCT CGATCGAGTG GAACCGCCCC GACACCGCCC GGATCGGCGT CACCGCGCGC
TATGTCGCCA GCCAATATGA GGACGACCAG AACAGCCGCC GCCTCGACGA CGCGCTGACC
TTCGACGCGG TCGCCGCGCT CGACCTCGGC CGGGGCTTCA CCGCCGAGCT GCGCGGCGAG
AACATCGCCA ACAAGCGCGT CGAGGCGACC GTCGGCGCCG ACGGCACCGT CGAACGCGCG
ACGCCGCGGA CGCTGTGGGT GGCGTTGAAG TACAGGCGGT AG
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| Protein sequence | MRHLRFLLTA ACVGLIAGPA WADDAAEIVV TGQGLPRSPG DAAFDVISID RARLEASASG
RMEDILRDAA GFQQFRRSDA RSAHPTSQGA TLRGLGGNAS TRALILLDGV PMVDPFGGWV
SWAALDPARI GHVRVTRGGG SGVYGPGALA GTIELSSMSP DEAHAVDASV AYGSRDSIDA
DATVTARLGG GFLMLSGGHA QGDGFIPVVE EDRGPIDRAA RYKQSRAAAR AVIPVGAETE
LQANGSFLLD RRDRGVPFTG NSNLAVDSSI RLVGRGRWGW EATAWLQHRE FSSGFASIGA
GRATVSQSLD QYNVPANGFG GRIELRPPLG EGISLRIGGD ARHVNGRTEE RVVSTNANRV
AGGEQNVFGG FAELALLPAT GLTLTASGRV DHWQLRDGQR TEISRATGAL IAANSARYPD
RSGTEATGRA GIAWSPPGAA AVSLRAAAYT GWRLPTLNEL YRPFRAGNDS TIANPLLDPE
RVKGIEGGAE YAPLPGWKLG ATIFWNRLDD AISNVTIAPN TRQRQNVDAI RSRGIEVDGM
ATLGEWRAIA SYSHIDPRVR ASGAALGLAG LRPAQTPRDQ ASASIEWNRP DTARIGVTAR
YVASQYEDDQ NSRRLDDALT FDAVAALDLG RGFTAELRGE NIANKRVEAT VGADGTVERA
TPRTLWVALK YRR
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