| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2833 |
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| Symbol | hemE |
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| ID | 5197758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3116149 |
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| End bp | 3117183 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582384 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001263324 |
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| Protein GI | 148555742 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0543255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCC TTCCCGCCGA GACGCGCCCC CTGCTCGCCG TGCTCCGGGG TGAGCGCCGC
GATCCCCCGC CGGTCTGGCT GATGCGCCAG GCGGGCCGCT ATCTTCCCGA GTATCGCGCG
CTGCGGGAGA CCAAGGGCGG CTTCCTCGAA CTGGCCTATG ACAGCGACGC CGCGGCCGAG
ATCACCCTCC AGCCGATCCG CCGCTTCGGC TTCGACGGCG CGATCCTATT CTCCGACATC
CTGATCATCC CGCATGCGAT GGGCCAGGAC CTGCGCTTCG AGGCGGGCGA GGGGCCGCGC
CTGTCGCCGA CCCTGGTCGA CCGGACGCTC GCCGATCTCG AACCGGTGCC GGCGCGGCTG
GAGCCGATCT ACGGCACCGT CCGCCGGGTG CGCGCGGCGC TGCCGGCCGA GACGACCTTC
CTCGGCTTCG CGGGCAGCCC CTGGACCGTC GCCACCTACA TGGTCGCGGG GCAGGGCAGC
CGCGAGCAGG CCGAGACGCG GCGCAAGGCC TATCGCGACC CGGCAGGATT CCAGGCGATC
ATCGACGCGC TGGTCGATGC CACCGCCGAT TATCTGTCGA AGCAGATCGA GGCGGGCGTC
GACGCGGTGC AGCTGTTCGA CAGCTGGGCG GGCAGCCTCG CCCCGCGCGA GTTCGAGCGC
TGGGTGATCG CCCCCACCGC CCAGCTGGTG CGCCGGCTCC ATGCGCGCCA TCCGGGCGTG
CCGGTGATCG GCTTCCCGAA GGGCGCGGGC GGCAAGCTCC CCGCTTATGC CCGCGAGACC
GGGGTCGACG CGGTCGGGCT CGACGAGACC GTCGATCCGG CCTGGGCCCA TGCCAACCTG
CCCGAGGGGC TGACCGTGCA GGGCAATCTC GATCCGCTCG CGCTGGTATC GGGGGGCGAG
GGGCTCGACA CCGCGGTCGA TGCGATCCTT GGGGCTTTCC CCGGACGCCC GCATGTGTTC
AACCTGGGCC ACGGAATCCT GCTCGATACG CCGATCGCCC ATGTCGAGCG GCTGCTCGCG
AGAGTCAGGG GATGA
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| Protein sequence | MAALPAETRP LLAVLRGERR DPPPVWLMRQ AGRYLPEYRA LRETKGGFLE LAYDSDAAAE
ITLQPIRRFG FDGAILFSDI LIIPHAMGQD LRFEAGEGPR LSPTLVDRTL ADLEPVPARL
EPIYGTVRRV RAALPAETTF LGFAGSPWTV ATYMVAGQGS REQAETRRKA YRDPAGFQAI
IDALVDATAD YLSKQIEAGV DAVQLFDSWA GSLAPREFER WVIAPTAQLV RRLHARHPGV
PVIGFPKGAG GKLPAYARET GVDAVGLDET VDPAWAHANL PEGLTVQGNL DPLALVSGGE
GLDTAVDAIL GAFPGRPHVF NLGHGILLDT PIAHVERLLA RVRG
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