Gene Swit_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2788 
Symbol 
ID5196788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3076269 
End bp3077117 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content72% 
IMG OID640582340 
Productpantothenate synthetase 
Protein accessionYP_001263280 
Protein GI148555698 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAATCG TTCGGAACAT AGACGATCTC CGGCAGGAGG TCGCAAAATT GAGGATAAGT 
GGGGCGCCGG TCGCGCTGGT GCCCACCATG GGGGCGCTCC ATCGCGGCCA TGTCGCGCTG
GTCGACGCCG CGCGCAGCCG CGGATGCGAG GTGGTGGTGT CGATCTTCGT CAATCCCACC
CAGTTCGGGC CAAGCGAGGA TCTCGACGCC TATCCGCGCC GCGAGGCGGC CGACGCGGCG
ATGCTCGACG GCGCGGGCGC GACGCTGCTC TGGGCGCCCG ACGTGGCGAC GATGTACCCG
CCGGGCTTCG CCACCAGCAT CTCGGTCGGC GGGGTCAGCG AGCGCTGGGA CGGCGCCGCC
CGCCCTGGCC ATTTCGCCGG GGTCGCGACC GTCGTCACCA AGCTGTTCCA GCAGGTGAAG
CCCGACATCG CCTTCTTCGG CGAGAAGGAT TTCCAGCAGC TCGCGGTGAT CCGCCGCTTC
GTCGCCGATC TCGACATCGA TATCGAGATC GTCGGCGTCC CCACCCAGCG CGACGACGAC
GGCCTCGCCC TCTCCTCGCG CAACGCCTAT CTGAGCCCCG AGGAGCGCGT CACCGCACGC
ACCCTGCCCC GCGCGCTTGG CGAGGCGGCG GCGGCGATCG GCCGGGGCGG CGACGTCGCG
GCGGCGCTGG CGGCGGCGAT CGCGCGGCTG GCCGAGGCGG GCTTCGACCC GATCGACTAT
GTCGCGCTGG TCGACGCGGC CAGCCTGGAG CCGATCGATC GCCTCGACGG CCCCGCCCGC
CTGATCGCCG CGGCCAGGCT CGGCGGCACC CGGCTGATCG ACAATCTGGC GGTGGAGCCG
GCTCCCTGA
 
Protein sequence
MQIVRNIDDL RQEVAKLRIS GAPVALVPTM GALHRGHVAL VDAARSRGCE VVVSIFVNPT 
QFGPSEDLDA YPRREAADAA MLDGAGATLL WAPDVATMYP PGFATSISVG GVSERWDGAA
RPGHFAGVAT VVTKLFQQVK PDIAFFGEKD FQQLAVIRRF VADLDIDIEI VGVPTQRDDD
GLALSSRNAY LSPEERVTAR TLPRALGEAA AAIGRGGDVA AALAAAIARL AEAGFDPIDY
VALVDAASLE PIDRLDGPAR LIAAARLGGT RLIDNLAVEP AP