Gene Swit_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2785 
Symbol 
ID5197724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3073725 
End bp3074486 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID640582337 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001263277 
Protein GI148555695 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.879557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCCGT TCGGGCTCTT TGATCGCTGG CGATTTCCGG TCCCCGACGC CCGGCGCGTC 
GGCTTCCTGA CGCGCACCCC CTTCGCCAAC AAGGGCCTTC ACGGCAGCCG CCATCCCGAG
AACAGCCGCG CCGCGATCGA GGCGGCGGTG GCGATGGGCT ATGGCGTCAA GGTCGACGTC
CAGTTCAGCC TCGACGGGCT CGCCTATGTC ATCGCCGATC CGACGATCGA GCGGATGACC
GGAGAGACCG GCCAGGTCCG GCATTTGTCG AGCAAGCATC TCGGCGAGGT CCGCCTGCGC
GACAGCGAGG AGACCATCCC CCAGCTCAAG GAGATATTGG GCCTGGTCGC GGGCCGCACC
CCGGTGCTGG TCGAGCTCCG CACGATCGAG GGCCATGTCT CGCAGCTCTG CGTCGCCGTG
CGCCACGCGA TCGAGGGCTA TCGCGGCGAG GCGGCGGTGA TGTCGCTCCA CCCCGAGGTG
CCGCGCTGGT TCGCCTCGCA CGGCAGCCGC ATCACCCGCG GGCTGATGCT GTCCGACGAC
AGCGTCTACG CCAAGGAAGC GGGAACCGAG CAGATCAAGG CGATCTGGCG CTCGCAGCCC
GAATTCCTGG CGATCGACAT CCAGGACCTG CCGAGCCGCT TCGCCCAGCG CCAGCGCAAG
CGCGGCATCC CGATCCTGGC CTGGACCGTG GGATCGGCCG AGCAGCAGGC GATCGCCGCC
GACTGCGCCG ACCAGATCAT CTTCGAGGCG CCCGGATGGT AG
 
Protein sequence
MSPFGLFDRW RFPVPDARRV GFLTRTPFAN KGLHGSRHPE NSRAAIEAAV AMGYGVKVDV 
QFSLDGLAYV IADPTIERMT GETGQVRHLS SKHLGEVRLR DSEETIPQLK EILGLVAGRT
PVLVELRTIE GHVSQLCVAV RHAIEGYRGE AAVMSLHPEV PRWFASHGSR ITRGLMLSDD
SVYAKEAGTE QIKAIWRSQP EFLAIDIQDL PSRFAQRQRK RGIPILAWTV GSAEQQAIAA
DCADQIIFEA PGW