Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2785 |
Symbol | |
ID | 5197724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3073725 |
End bp | 3074486 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582337 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_001263277 |
Protein GI | 148555695 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.879557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGCCGT TCGGGCTCTT TGATCGCTGG CGATTTCCGG TCCCCGACGC CCGGCGCGTC GGCTTCCTGA CGCGCACCCC CTTCGCCAAC AAGGGCCTTC ACGGCAGCCG CCATCCCGAG AACAGCCGCG CCGCGATCGA GGCGGCGGTG GCGATGGGCT ATGGCGTCAA GGTCGACGTC CAGTTCAGCC TCGACGGGCT CGCCTATGTC ATCGCCGATC CGACGATCGA GCGGATGACC GGAGAGACCG GCCAGGTCCG GCATTTGTCG AGCAAGCATC TCGGCGAGGT CCGCCTGCGC GACAGCGAGG AGACCATCCC CCAGCTCAAG GAGATATTGG GCCTGGTCGC GGGCCGCACC CCGGTGCTGG TCGAGCTCCG CACGATCGAG GGCCATGTCT CGCAGCTCTG CGTCGCCGTG CGCCACGCGA TCGAGGGCTA TCGCGGCGAG GCGGCGGTGA TGTCGCTCCA CCCCGAGGTG CCGCGCTGGT TCGCCTCGCA CGGCAGCCGC ATCACCCGCG GGCTGATGCT GTCCGACGAC AGCGTCTACG CCAAGGAAGC GGGAACCGAG CAGATCAAGG CGATCTGGCG CTCGCAGCCC GAATTCCTGG CGATCGACAT CCAGGACCTG CCGAGCCGCT TCGCCCAGCG CCAGCGCAAG CGCGGCATCC CGATCCTGGC CTGGACCGTG GGATCGGCCG AGCAGCAGGC GATCGCCGCC GACTGCGCCG ACCAGATCAT CTTCGAGGCG CCCGGATGGT AG
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Protein sequence | MSPFGLFDRW RFPVPDARRV GFLTRTPFAN KGLHGSRHPE NSRAAIEAAV AMGYGVKVDV QFSLDGLAYV IADPTIERMT GETGQVRHLS SKHLGEVRLR DSEETIPQLK EILGLVAGRT PVLVELRTIE GHVSQLCVAV RHAIEGYRGE AAVMSLHPEV PRWFASHGSR ITRGLMLSDD SVYAKEAGTE QIKAIWRSQP EFLAIDIQDL PSRFAQRQRK RGIPILAWTV GSAEQQAIAA DCADQIIFEA PGW
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