Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2763 |
Symbol | |
ID | 5198411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3054789 |
End bp | 3055220 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640582316 |
Product | thioesterase superfamily protein |
Protein accession | YP_001263256 |
Protein GI | 148555674 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.531618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCC CCTTCCCCCC GCTCCGGTTC GACCGCGACG ATCTCGCGGC CTTCATCGAC CGCTCCTTCC CGGCCAGGGC CCGTCCCGCG CTGGGTGATC TCGTGTCGAT CGCGCCCGGC CATGCCCGGC TGCGGCTCGA TCCCGACGAG GACATGGTCC GGCCGGGCAA TATCGTTTCT GGCCCGACAT TGATGGGACT GGTCGATGTC GCCGCCTGGG CGGTGGTGCT CGCCCATGTC GGGCCGGTCG CGATGGCGGT GACGCACAAC CTGACCATCT CCTTCCTGCG CGGCTGTCCG GTGGCGCCGG TGATCGCCGA TGCGCGGCTG CTCAAGCTCG GCCGGCGGCT GGCCACGATC GACGTGCGGC TGTGGCAGGA CAGCGAGGAG CGGCTGATCG CACAGGCGAC CGTGGGCTAC GCGCTGCCCT GA
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Protein sequence | MTSPFPPLRF DRDDLAAFID RSFPARARPA LGDLVSIAPG HARLRLDPDE DMVRPGNIVS GPTLMGLVDV AAWAVVLAHV GPVAMAVTHN LTISFLRGCP VAPVIADARL LKLGRRLATI DVRLWQDSEE RLIAQATVGY ALP
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