Gene Swit_2758 details

Gene Information

• Locus tag: Swit_2758
• ID: 5199465
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingomonas wittichii RW1
• Kingdom: Bacteria
• Replicon accession: NC_009511
• Strand: +
• Start bp: 3047359
• End bp: 3048120
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 640582311
• Product: tetratricopeptide domain-containing protein
• Protein accession: YP_001263251
• Protein GI: 148555669

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.141367
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGTCGC TGCTCATTGC CGCTGCCGTC GCCGCGGCGC CCCCCGCCGC CCCGCCGAAC 
CAGGAAGCGC ACAGCGTGCG CGGCCGCAAA TGCGCGGCGC TGGCCGACAG CAACCCGACC 
GCCGCGATCG ACGAGGCGCA GGCCTGGGCC GCGGCCGGCG GCGGCATGGC CGCGCGCCAG 
TGCCTCGGCA TCGCCCAGTC GACGCTGGAA CAATGGCCGG CGGCGGCCGC GACCTTCGAA 
GGCGCCGCCA AGGACGCCCA GATCGCGACG GACCCGATGG CGGTGGTGCT GTGGATGCAG 
GCGGGCAACG CCGCGCTGGC CGGCGACGAC CCGGCCCGCG CCCGCGCCGC CTTCGATCGT 
GCGCTGGCGC TGCCCGGCCT GTCCGACGAG ATGAAGGGCG AGGTCCATCT CGACCGCGCC 
CGCGCCGGCG TCGCCGTCAA CGACCTGCCC GGCGCCAAGG GCGACCTGGC CGAGGCGACC 
CGACTGGTGC CGCGCGACGC GCTCGGCTGG CTGCTCAGCG CCAACCTCGC GCGGCGGATG 
AAGGACCTGC CGCTCGCCTT CAGCGCGATC CGCCAGGCGG CGGCGCTGTC GCCCGACGAT 
CCCTCGATCG CCTATGAGGC CGGCAATATC GCCGCCGCCT CGGGCAACAT GGCCGATGCC 
AAGGCCGCCT GGACCCGCGC CGCGACCGCC GCGCCCGACA GCAATGCCGG CAAGGCGGCG 
GCGCTGGCGC TGAAGGGCGG GGAGGCGGCG TCTCCGCAAT AG 

 

Protein sequence

MLSLLIAAAV AAAPPAAPPN QEAHSVRGRK CAALADSNPT AAIDEAQAWA AAGGGMAARQ 
CLGIAQSTLE QWPAAAATFE GAAKDAQIAT DPMAVVLWMQ AGNAALAGDD PARARAAFDR 
ALALPGLSDE MKGEVHLDRA RAGVAVNDLP GAKGDLAEAT RLVPRDALGW LLSANLARRM 
KDLPLAFSAI RQAAALSPDD PSIAYEAGNI AAASGNMADA KAAWTRAATA APDSNAGKAA 
ALALKGGEAA SPQ