Gene Swit_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2729 
Symbol 
ID5197945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3011754 
End bp3013115 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content73% 
IMG OID640582283 
ProductFolC bifunctional protein 
Protein accessionYP_001263223 
Protein GI148555641 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.618576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC CAGTCCAGGG AACAGGCCCA CCCTCCATGC CCGACCACGC CGTCTCCACC 
GATCCCGCCG TCCAGGCGCA GCTCGACCGG CTGTGGCGGC TGTCGCCGGG CGCCGACATC
CTCGGGCTCG ACCGGATCGC GCGGCTGTGC GATCGGCTCG GCAATCCCGA ACGCGCGCTG
CCGCCGGTGT TCCACGTCGC CGGCACCAAC GGCAAGGGAT CGACCTGCGC CTATCTGCGC
GCCGCGATCG AGGCGGCGGG GATGAGCGCG CACGTCTTCA CCAGCCCGCA CCTGATCCGC
TTCAACGAGC GCATCCGCAT CGCGGGATCG CTGATCGAGG ACGCCGCGCT CGCCGCGCTG
CTCGCCGAGG TGCTCGACGT CTCCGAAGGG ATCGGCGCGA GCTTCTTCGA GGTGACGACC
GCCGCCGCCT TCCTCGCCTT CAGCCGCACC CCCGCCGACG CCTGCATCGT CGAGGTCGGG
CTGGGCGGCC GGCTCGACGC GACCAACGTC ATCGCCGATC CGCTGGTCTG CGGCATCGCC
CAGCTCGGGC TCGACCATCA GAGCTTCCTC GGCGACACGA TCGAGGCGAT CGCGGCGGAG
AAGGCCGGCA TCGCCAAGCC GGGCGTGCCG ATCCTGACGC TCCATTATCC CGCCACCGTC
GCCAACGAGA TCGGCCGCGC GATCCGCGAG GCGGGCGCCG AGTGGCACGT CAAGGGCGGC
TCGTGGGACG CCGCCGCCTA TCAGGGCCGG CTCCATTATC GCGACGCGCA GGGCAAGCTC
GACCTGCCGC TGCCCGGGCT CGCCGGCCAG CACCAGGCGA TGAACGCCGC TCTGGCGGTG
GCGATGCTGC GCCACCAGGA CGCGATCGCG ATCCCCGCCT CGGCGCTGCG CGCGGCGATG
GGCTGGGCCG ACTGGCCGGC GCGGCTCCAG CACCTGCGCG GCGGCGCGCT GCTCGACCGG
CTGCCGCCCG GATCGGACCT GTGGATCGAC GGCGGCCACA ACCCCTCGGC GGGGCGGGTG
ATCGGCGATT TCCTGCGCGG CCATGTCGCG CCCGAGCGGC CGCTCCACAT CGTCCTCGGC
CTGCTCGCCA ACAAGGACGC CGGCGGCTTC CTGGCCGCGA TGGGCCGGGT GCCGGCGCAT
TTCCACATGG TGCCGGTGCC AGGCCACGAG CACCACGCCC CCGTGACCCT CGCCGACACC
GCCCGCCTCG CCGGCTTCGC CGCCGACGCC GCGACCGGCT TCGAGGAAGC CCTCGCGACG
ATCGCGGCCG ACGCCGGCGA CGTCCCGCCG ATGGTGCTGA TCGGCGGCTC GCTCTACCTC
GCGGGCAAAG CGCTGGAGGC GAACGGGACG GTGATCGACT GA
 
Protein sequence
MTPPVQGTGP PSMPDHAVST DPAVQAQLDR LWRLSPGADI LGLDRIARLC DRLGNPERAL 
PPVFHVAGTN GKGSTCAYLR AAIEAAGMSA HVFTSPHLIR FNERIRIAGS LIEDAALAAL
LAEVLDVSEG IGASFFEVTT AAAFLAFSRT PADACIVEVG LGGRLDATNV IADPLVCGIA
QLGLDHQSFL GDTIEAIAAE KAGIAKPGVP ILTLHYPATV ANEIGRAIRE AGAEWHVKGG
SWDAAAYQGR LHYRDAQGKL DLPLPGLAGQ HQAMNAALAV AMLRHQDAIA IPASALRAAM
GWADWPARLQ HLRGGALLDR LPPGSDLWID GGHNPSAGRV IGDFLRGHVA PERPLHIVLG
LLANKDAGGF LAAMGRVPAH FHMVPVPGHE HHAPVTLADT ARLAGFAADA ATGFEEALAT
IAADAGDVPP MVLIGGSLYL AGKALEANGT VID