Gene Swit_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2702 
Symbol 
ID5200961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2987790 
End bp2988524 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID640582256 
Productclass II aldolase/adducin family protein 
Protein accessionYP_001263196 
Protein GI148555614 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00187501 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCA CCCCGTCGGA CGAAGCGCGG CTTCGCCAGC AGCTCACCGA CTTCTACCAT 
CTGGTCGATT ATTTCGGCTG GTCCGAACTG ATCTTCAACC ATATCTCGGC CCGGCTGCCG
GGGCCCGACC ATCATTATCT CGTCAACCCG TTCGGGCTCG ACTATCGCGA GGTCCGGCCC
GACAACCTGC TGGTCGTCGA CGTCGCCGGG AACAAGCTCT GCTCATCCAA CCATGACGCC
AACCCGGCCG GCTTCGCGCT GCACGGCGTG ATCCACCAGA ACCGGCCCGA CGCGATGTGC
GTCGCGCACA CCCACAGCAA CGCGCTGTCG GCGGTGGCGA TGAAGCGCGA CGGCTTCGAC
CATAATAATT TCTACGGCGC GCAACTCTTC GGCCGGGTCG GCTATCATGA TTTCGAGGGC
ATCACCCTCT ATGACGACGA GCGGCCGCGC ATGCTCGAAA GCCTCGGCGA CCGGCATGTG
CTCGTCCTGC GCAACCATGG CGTCGCGGTG TGCGAGCGCG ACATCCCGAC CACCTTCATG
CTGCTCTGGA CCGCCCAGCG CGCCGCCGAG ATCCAGTGCA TGGCGGGCCA GGCCGGCGGC
CCCGACGTCC CCCTGCCCGA CGAGGTCAAG CAGCGCTGCG CCGCCGACGC GCTGCGCCTC
GTCGAGCATG CCCAGTTCGC CGAGCTGGTG TTCGACGCGC AGGTGCGCCG GATGAAGCAG
CAGCGCGGCT GGTAG
 
Protein sequence
MASTPSDEAR LRQQLTDFYH LVDYFGWSEL IFNHISARLP GPDHHYLVNP FGLDYREVRP 
DNLLVVDVAG NKLCSSNHDA NPAGFALHGV IHQNRPDAMC VAHTHSNALS AVAMKRDGFD
HNNFYGAQLF GRVGYHDFEG ITLYDDERPR MLESLGDRHV LVLRNHGVAV CERDIPTTFM
LLWTAQRAAE IQCMAGQAGG PDVPLPDEVK QRCAADALRL VEHAQFAELV FDAQVRRMKQ
QRGW