Gene Swit_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2701 
Symbol 
ID5200960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2987066 
End bp2987545 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content62% 
IMG OID640582255 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001263195 
Protein GI148555613 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0065289 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCA ACGGCAAGCT CGACGGGTTC GACCGCAAGA TCCTCGCCTG CGTGCAGGAG 
AATGGCGGCA TCGGCCCCAG CGAGCTCAGC ACCCTGATCC ACCTGTCGCC GGCGCAATGC
TCGCGCCGGC TGCAGCGGCT GAAGGACGAG GGCTATGTCG AGAAAATCGC CGGCATCCTC
GCCCGGCCAC GGCTCAACCT CAACGTCTCC TCCTACATCA TCGTCAAGAT CAAGGACCAT
GGCGCCGATA CGGAGGCGCG CTTCAAGCAG CTCGTCGACG CGCTGCCCGA GGTCACCTCG
TGCGAATATA TCGCCGGCGA CGCCGACTAT ATCCTGCGCG TCGTCACCCG CGACCTGGAA
AGCTATTCGG AGTTCATCTC GAACAAGCTG ATGGTCGGCG GCGACATCGT CTCGATCCGG
TCGAACATCA TCCTCAAGGG GATGAAGCAG ACCACGGCGC TGCCGCTCGA CTATTGCTGA
 
Protein sequence
MSSNGKLDGF DRKILACVQE NGGIGPSELS TLIHLSPAQC SRRLQRLKDE GYVEKIAGIL 
ARPRLNLNVS SYIIVKIKDH GADTEARFKQ LVDALPEVTS CEYIAGDADY ILRVVTRDLE
SYSEFISNKL MVGGDIVSIR SNIILKGMKQ TTALPLDYC