Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2701 |
Symbol | |
ID | 5200960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2987066 |
End bp | 2987545 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640582255 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001263195 |
Protein GI | 148555613 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0065289 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCA ACGGCAAGCT CGACGGGTTC GACCGCAAGA TCCTCGCCTG CGTGCAGGAG AATGGCGGCA TCGGCCCCAG CGAGCTCAGC ACCCTGATCC ACCTGTCGCC GGCGCAATGC TCGCGCCGGC TGCAGCGGCT GAAGGACGAG GGCTATGTCG AGAAAATCGC CGGCATCCTC GCCCGGCCAC GGCTCAACCT CAACGTCTCC TCCTACATCA TCGTCAAGAT CAAGGACCAT GGCGCCGATA CGGAGGCGCG CTTCAAGCAG CTCGTCGACG CGCTGCCCGA GGTCACCTCG TGCGAATATA TCGCCGGCGA CGCCGACTAT ATCCTGCGCG TCGTCACCCG CGACCTGGAA AGCTATTCGG AGTTCATCTC GAACAAGCTG ATGGTCGGCG GCGACATCGT CTCGATCCGG TCGAACATCA TCCTCAAGGG GATGAAGCAG ACCACGGCGC TGCCGCTCGA CTATTGCTGA
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Protein sequence | MSSNGKLDGF DRKILACVQE NGGIGPSELS TLIHLSPAQC SRRLQRLKDE GYVEKIAGIL ARPRLNLNVS SYIIVKIKDH GADTEARFKQ LVDALPEVTS CEYIAGDADY ILRVVTRDLE SYSEFISNKL MVGGDIVSIR SNIILKGMKQ TTALPLDYC
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