| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2673 |
|---|
| Symbol | |
|---|
| ID | 5200101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2952720 |
|---|
| End bp | 2953280 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640582227 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001263167 |
|---|
| Protein GI | 148555585 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1678] Putative transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCGC CAGCCTCTCT CCGCGGGCAG TTGCTGCTCG CCATGCCCGG CATCGGCGAC
CCGCGCTTCG AAAAGGCGGT GATCGCGATG TGCGCGCATG ACGAGAATGG CGCGCTCGGC
GTCGGGGTCG ACCGGGTCAT GCCCGGCATC ACCCTGCACG GGCTGCTCGA ACAGCTCGAC
GTCGATCCCG GCATCGCCCC CGACTGCGAC ATCCTGCTCG GCGGGCCGGT CGAGCAGCGG
CGCGGCTTCG TCCTGCACAG CACCGACTGG CTGGGCGAGG ACAGCCTGCT GGTCGAGGAC
CGCTGGTGCC TGACCTCGAC GCTCGACGTG CTGCGCGCCA TCGCCGAGGG CAAGGGCCCG
GCGCGCTGGC TGGTCGCATT GGGCTATGCC GGCTGGGGCG AAGGCCAGCT CGACGGCGAG
ATGCGCCGCC ACGGCTGGCT CGCGACTCGG GCCGAGGACG GGCTGATCTT CGACCATCGC
CCGCCGCGCC GCTGGGAGGC GGCGATGCGC TCGGCGGGGA TCGATCCCCG CCTGCTCGCG
GCCACCAGCG GCCAGGCCTG A
|
|---|
| Protein sequence | MDAPASLRGQ LLLAMPGIGD PRFEKAVIAM CAHDENGALG VGVDRVMPGI TLHGLLEQLD
VDPGIAPDCD ILLGGPVEQR RGFVLHSTDW LGEDSLLVED RWCLTSTLDV LRAIAEGKGP
ARWLVALGYA GWGEGQLDGE MRRHGWLATR AEDGLIFDHR PPRRWEAAMR SAGIDPRLLA
ATSGQA
|
|---|
| |