| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2668 |
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| Symbol | |
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| ID | 5196457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2946988 |
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| End bp | 2948160 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582222 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001263162 |
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| Protein GI | 148555580 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAG CGGTGATCAT CATCATCATT GCGCTGATCT TCAGCGCCGC GATGCTGACG
GGGGTGATGC TGATCGCCTG GCGCAGCTTC GGCCGGCCGC GCCATGCCCT GCTGTGGGCG
GCGGCCTTCG CGGTGGCGAC GGTCGAATGG ATCGCCAACC TCGCCTTCCG GATCGCCCAG
GCCGAGGACA ATGGCGCGTT CTACGCGGCG ATCGCCGGGC TGAGCTGCCT GTCCAACGCG
CTGATCGCGG CGGGCTTCGT CCAGCGCAGC CGGCCGCAGG CGGGGCCGGC GCCCTTCCTG
ATCGCCGCCG CCGGCGCCGC GCTGCTGATC GCGGGCGCCG CGATCGTCGT CCCGCATGAC
GGGGTGCGCG ACGCGACCGG GCTGCTGTTC GGCGGGGCGA TGATGGCGAT CAGCGCCGCG
CATGTCGGCC GCGGCTTCCG CACCGCATCG CTGCCCGAAC GATCGGTCAC GCTGATGTTG
ATGCTGTTCG CGCTGCTCGA CGGAGCGATG GCGGTCATCG CGCTGCGCCA GGGCATCGTC
GGACAGGGCG AGGCGTTCGC GCTGTTCCGC ACCATCCTCC TGCTGCTCTA TCCGCCGGCC
TTCATCGGCG TCGGGCTATT CTCGGTCTTC CTCGTCGCAG CGGACCTGGC GGAGACGATG
CGGACGCTGG CGACGTCGGA CATGCTGACC GGCGTCTACA ACCGGCGCGG CTTCGAGGAC
GCCGCCGAGC GCGCGATCCG CAACGCCCAT CGCCAGCGCC AGCCGCTGTC GGTGGTGGTT
GCCGACATCG ACGGCTTCAA GGCGATCAAC GACCGCTACG GCCACGGCGT CGGCGATCGC
GCGCTGCGCC ACTTCGCCAG CCGGATCGAG CGGCTCGTCC GGCGCGGCGA CCTGATCGGC
CGGATCGGCG GCGAGGAATT CGCGCTGCTC CTCGTCAACA CCCGCCCGCA AGACGCCGTC
GAGGTGGTCG AGCGCATCCG CCGCGACATC GCCGCGATGC CGGTCAGCGG CCCCGACCGC
GTCGTCATGA CCGCCAGCTT CGGCCTCACC GGGCTCCGGC CCGGCGACAT CTCGCTCGCC
TCGCTCCTCG CCCGCGCCGA CCGCGCGCTC TATCGCTCGA AGCTCGACGG CCGCGACCGG
GTGACGAGCG CCGAGGAATT GGAAGAGGCG TAA
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| Protein sequence | MAAAVIIIII ALIFSAAMLT GVMLIAWRSF GRPRHALLWA AAFAVATVEW IANLAFRIAQ
AEDNGAFYAA IAGLSCLSNA LIAAGFVQRS RPQAGPAPFL IAAAGAALLI AGAAIVVPHD
GVRDATGLLF GGAMMAISAA HVGRGFRTAS LPERSVTLML MLFALLDGAM AVIALRQGIV
GQGEAFALFR TILLLLYPPA FIGVGLFSVF LVAADLAETM RTLATSDMLT GVYNRRGFED
AAERAIRNAH RQRQPLSVVV ADIDGFKAIN DRYGHGVGDR ALRHFASRIE RLVRRGDLIG
RIGGEEFALL LVNTRPQDAV EVVERIRRDI AAMPVSGPDR VVMTASFGLT GLRPGDISLA
SLLARADRAL YRSKLDGRDR VTSAEELEEA
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