| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2658 |
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| Symbol | |
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| ID | 5198482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2939699 |
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| End bp | 2940172 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582212 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_001263152 |
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| Protein GI | 148555570 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGCG ACCGTCCCAT CGTCCTCGCG GCGATCATCG GCGCGCACGG GTTGCAGGGC
GAGGTGCGCC TCAAGCTCTT CACCGAGGAT ATGGGCGCCT ACAGGACGCT AGACGGCGCC
GGGCGCAGCT TCACGCTGAA GACGATCCGT CCCGGCCCGA ACGGCGCGGT GGCGCGCTTC
GCCGAGATCG GCGACCGCAA CGCCGCCGAG GCGCTGCGCG GGACCGAGCT GAGCGTGCCG
CGCTCGGCGC TGCCGCCGCT CGCCCCGGGC GAATATTATC ATGTCGACCT GATCGGCCTG
CCCTGCCTGG TCGACGGCGC GCCGGTCGGC GTCGCCGCGA TGGTCGAGGA TTTCGGCGCG
GGCGACGTGC TCGAGATAGA GAAGCCCGAC GGCAAGCGCT TCATGGTGCC CGTCGCCAAG
GCGGTGACGA TCGAGCCCGA TCGCCTGCTG ATCGACCCGG AGTTCGTCGA ATGA
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| Protein sequence | MSSDRPIVLA AIIGAHGLQG EVRLKLFTED MGAYRTLDGA GRSFTLKTIR PGPNGAVARF
AEIGDRNAAE ALRGTELSVP RSALPPLAPG EYYHVDLIGL PCLVDGAPVG VAAMVEDFGA
GDVLEIEKPD GKRFMVPVAK AVTIEPDRLL IDPEFVE
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