| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2653 |
|---|
| Symbol | |
|---|
| ID | 5201017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2933513 |
|---|
| End bp | 2934043 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640582207 |
|---|
| Product | Serine acetyltransferase-like protein |
|---|
| Protein accession | YP_001263147 |
|---|
| Protein GI | 148555565 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1045] Serine acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.223277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACA TTTTTCGGAT TCTGAAGGAG GATTGGCGCA GTAACCGCGG AGCGGGCCTA
GTCAGCCAGC TTTTTCTTAT AAACTATCGA CTGGGTAGAA TCGCTCTACA GAAAAAAGAG
AAGTACGGAA CTCCCATCCT CCTAGGATAT TTGCCTCTGT TGTTGAATGC TAGGTTTCTA
TCCCTTTTTT TAGGATGCTC GATTCCATTT TCAACGAAAC TCGGCCGACG GATACGGTTC
CAGCATGGCT TGCAAGGAAT ATTCATCTCT GGCCTGGCGT CGGTTGGAGA TGATTGTCTG
ATTTTGCATC AGGTTACGAT AGGATCTAAT ATCGGAAGCC GAAGCGGACG GCCTGCAGCC
CCCCGGATTG GAAATCGGAT TTTCATTGGA GTTGGCGCGA AAATCATAGG TGATTTGGAT
GTGGGTGACG ACGCTATGAT TGGCGCTCAG GCTCTCGTTA TTCGATCTGT TCCATCGGGT
GCAAGATGCC ACGCGCCTTC CGCGGAGATA CGAATGGGTT TAGAGGCGTG A
|
|---|
| Protein sequence | MPNIFRILKE DWRSNRGAGL VSQLFLINYR LGRIALQKKE KYGTPILLGY LPLLLNARFL
SLFLGCSIPF STKLGRRIRF QHGLQGIFIS GLASVGDDCL ILHQVTIGSN IGSRSGRPAA
PRIGNRIFIG VGAKIIGDLD VGDDAMIGAQ ALVIRSVPSG ARCHAPSAEI RMGLEA
|
|---|
| |