Gene Swit_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2645 
Symbol 
ID5200996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2926689 
End bp2927843 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content71% 
IMG OID640582201 
Productglycosyl transferase, group 1 
Protein accessionYP_001263141 
Protein GI148555559 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGTCC TCGTCCTAGC GTCCTTCGCG CCGTCGCTGG TGCTCTTTCG CGGGCCGTTG 
ATCGCGGCGC TGGTTGCGGC CGGGCATGAG GTCGTCGCGG TCGGGCCGGC CATGGATGCG
CCGCTTCTCG GCGAGTTGCG CCGGCTCGGG GCCACGCCGC TCGATCTGCC GCTCAGCCGC
ACCGGCATGA ACCCGGTCCA CGACCTGCTC TATGGCTGGC GCCTCTACCG GGCGATGCGC
CGCCTCCGGC CCGATCTGGT GCTGAGCTAT ACCGCCAAGC CGAACATCTG GGGCGCGATC
GCCGCGAGCG CCGCCGGGGT TCGGTCGGCG GCGATGGTCA CCGGGCTCGG CTTCGCCTTC
ACCGATGCCG GCGAGCGCAA CTGGAAGCGC GCGCTGGTGC AGAAGGTCCA GACCTGGCTC
TATCGCCGCG CGACCGGTCG CAACGCGGTG GTGGTGTTCC AGAATCCCGA CGACCGCGAC
GACTTCATCG CCGCCGGCTG CCTCGCCGAT CTCGGCAAGG CGCGGATGGT CAACGGCTCG
GGCGTCGACC TCGATCATTT CGCGCCGTCG CCGCGGCCCG ACGCGCCGCA TTTCCTGATG
ATCGCGCGCC TGCTGAAGAG CAAGGGCGTG CGCGAATATG CCGAGGCGGC GATCCGGCTC
AAGGCGCGCC ACCCCGCGGC GCGCTTCTCG CTCGTCGGCT TTTTCGACGA AGGCCCCGAC
GGCGTCGCCC CGGCGGCGGT GGCCGAATGG CAGGCGCGGG GGCTCGACCA TCTCGGCGGC
CTCGGCGACG TGCGTCCGGC GCTCGCGGTC GCCTCGGCCT ATGTCCTGCC CTCCTATCGC
GAGGGCACGC CCCGCTCGGT GCTCGAGGCG ATGGCCAGCG GACGGGCGAT CCTCACCACC
GACGTGCCCG GCTGTCGCGA AACCGTCGTC GACGGCGTCA ATGGCTTCCT CGTCCCGGCG
CGCGACGCCG ACGCGCTGGC CGACAGGATG GCGTGGATGA TCGAGAACCC CGAAGCCGTC
GCCGCGATGG GCGAGCAGAG CCTGCGCATC GCGCGCGAGA AATATGACGT CCACAAGGTG
AACCAGACCA TCATGAACCA TCTCGGGCTG ACCCGGGCGC CGGATGCCGC TATCGAACCG
GGATGCCGCT CATGA
 
Protein sequence
MKVLVLASFA PSLVLFRGPL IAALVAAGHE VVAVGPAMDA PLLGELRRLG ATPLDLPLSR 
TGMNPVHDLL YGWRLYRAMR RLRPDLVLSY TAKPNIWGAI AASAAGVRSA AMVTGLGFAF
TDAGERNWKR ALVQKVQTWL YRRATGRNAV VVFQNPDDRD DFIAAGCLAD LGKARMVNGS
GVDLDHFAPS PRPDAPHFLM IARLLKSKGV REYAEAAIRL KARHPAARFS LVGFFDEGPD
GVAPAAVAEW QARGLDHLGG LGDVRPALAV ASAYVLPSYR EGTPRSVLEA MASGRAILTT
DVPGCRETVV DGVNGFLVPA RDADALADRM AWMIENPEAV AAMGEQSLRI AREKYDVHKV
NQTIMNHLGL TRAPDAAIEP GCRS