Gene Swit_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2616 
Symbol 
ID5199899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2898134 
End bp2898523 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content71% 
IMG OID640582172 
Productcopper resistance protein CopC 
Protein accessionYP_001263112 
Protein GI148555530 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.815455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACC TTACCTCGAT CGTCGCCCCG GCCCTGGCCG CCGTCGCCCT GCTGTCCGGC 
GGCGCGGCGC TCGCCCACGC CAAGCTCGTC GTCGCCACGC CCGCGGCGGA CGCCAGCGCG
TCGAACGTGC GGACCGTCAC GCTGACCTTC TCGGAATCGC CGGTCGAGAA GCTCTCGGGC
GTCGAGATCG TCATGACCGC GATGCCGGGC ATGGCCAAAC ATGCCCCGAT GCCGGTGAAG
GGCATCAAGA CCGCGCTCGG CAGCGACGGC AAGACGCTGG TCGTCAACCT GCCCCGCACC
CTGCCGGCAG GCAGCTACGG CCTGACCTGG CACGTCGTGA CCGGGGATAC CCACCGCAGC
GAGGGCGGCT ACGCCTTCTC GGTGAAGTGA
 
Protein sequence
MRHLTSIVAP ALAAVALLSG GAALAHAKLV VATPAADASA SNVRTVTLTF SESPVEKLSG 
VEIVMTAMPG MAKHAPMPVK GIKTALGSDG KTLVVNLPRT LPAGSYGLTW HVVTGDTHRS
EGGYAFSVK