| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2601 |
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| Symbol | |
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| ID | 5200229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2882412 |
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| End bp | 2884379 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582157 |
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| Product | transketolase |
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| Protein accession | YP_001263097 |
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| Protein GI | 148555515 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTG CATCGAGGCA GCTCGCCAAT GCCATTCGCG CGCTTGCGAT GGACGCGGTG
CAGGCCGCCA ATTCGGGCCA CCCCGGCATG CCGATGGGCA TGGCCGACGT CGCGACCGAG
CTGTTCACGA AGCATCTGAA ATATGATCCG GCCCAGCCCA GATGGGCGGA CCGCGACCGC
TTCGTCCTGT CGGCGGGCCA CGGATCGATG CTGATCTACG CGCTGCTCCA CCTGACCGGC
TATGCGCGCC CGACGATCGA GGATATCCGC AACTTCCGCC AGCTCCACAG CCCGTGCGCC
GGCCACCCCG AGAATTTCGA GCTGGCGGGC GTCGAGGCGA CCACCGGCCC GCTCGGCTCG
GGCCTCGCCA CCGCGGTCGG CATGGCGATC GCCGAGCGGC ACCTGAACGC GAGCTTCGGC
ACCGACCTGG TCGACCATCA TACCTGGGTG ATCGCCGGCG ATGGCTGCCT GATGGAAGGC
ATCAACCATG AGGCGATCGG CCTGGCCGGC CATCTGAAGC TCGGCCGCCT GATCGTGCTG
TGGGACGACA ACAGGATCAC CATCGACGGC GCGGTCTCGC TCAGCTCGTC GGAGGACGTG
CTCGCCCGCT ACGCCGCCAC CGGCTGGCAC ACCGTGTCGT GCGACGGCCA TGACCCCGAC
AGCATCAACA CGGCGCTGGA GGCGGCCAAG GCCGATCCGC GCCCGTCGAT CGTCCAGTGC
ACCACCGTGA TCGGCTATGG CGCGCCGAAC AAGCAGGGCA CCTCGGCCAC CCATGGCGCC
GCGCTCGGCG TCGATGAGGT CGCGGCGGCG CGCGGCTATC TCGGCTGGAC CGCCGAGCCG
TTCGTCATCC CCGAGGACAT CAAGGCCGCC TGGGCCGAGG CCGGCCATCG CGGCACCGCG
ACGCGCAGCG CCTGGGAAGC GCGCCTCGTC GCCTCGAAGG ACCGCGCCGA GTTCGAGCGC
CGCATGGCGG GCGCGCTGCC GGCCGGCTTC TCGCTCGACG CCTATATCAA GGAACTCGCC
GCCAACCCGC AGAAGGTGGC GACCCGCAAG GCGTCCGAGA TGGCGCTGGG CCCGATCAAC
GAGCAGCTTC CCGAGACGGT CGGCGGCTCG GCCGACCTGA CCGGATCGAA CAACACCAAG
ACCAAGGGCC AGGCGCCGCT GACCGCCGAG GACTATGCGG GCCGCTATAT CTATTACGGC
ATCCGCGAGT TCGGCATGGG CTGCGCGATG AACGGCCTCG CCCTGCACGG CGGCGTCATC
CCCTATGGCG GCACCTTCAT GGTCTTCTCC GACTATTGCC GCCCGGCGAT CCGCCTGTCG
GCGCTGCAGC AGCAGCGCGT CGTCTATGTC ATGACGCATG ATTCGATCGG CCTGGGCGAG
GATGGCCCGA CCCACCAGCC GGTCGAGCAT CTGATGAGCC TGCGCGCGAT GCCGAACCTC
GACGTCTATC GCCCGTGCGA CGCGATCGAG ACCGCCGAAT GCTGGCAGCT CGCGCTGGAG
AAGGCCGACG GCCCGTCGCT GCTGGCGCTG TCGCGCGAGG GCCTGCCGCA GGTCCGCACC
GACATCAGCG AGAATTTCTC GGCGAAGGGC GCCTATCGGC TGAAGGCGGC CGAGGCCACG
CGCAAGGTGG TGCTGATCGC CAGCGGCTCC GAGGTCGAGA TCGCGCTCGC CACCGCGAAG
AAGCTCGAAG AAGCCGGCCA TGGCGCCGAT GTCGTCTCGA TGCCGAGCTG GGAGCGCTTC
GACGCGCAGC CCGAAAGCTA TCGCGACGCG ATCCTGCCCG AGGGCGTGTT GCTCGTCTCG
ATCGAGGCCG GCACGACGAT GGGCTGGGAA CGCTATGTCG GCCGCAAGGG CCTGCGCTTC
GGCGTCGACG GCTTCGGCGC CTCGGCCCCG GTCAAGGCGC TCTACGATCA TTTCGGCCTG
ACGGCCGACA AGCTCGCCCC GCGGATCATC GGGGCGCTCG CCAACTAA
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| Protein sequence | MTIASRQLAN AIRALAMDAV QAANSGHPGM PMGMADVATE LFTKHLKYDP AQPRWADRDR
FVLSAGHGSM LIYALLHLTG YARPTIEDIR NFRQLHSPCA GHPENFELAG VEATTGPLGS
GLATAVGMAI AERHLNASFG TDLVDHHTWV IAGDGCLMEG INHEAIGLAG HLKLGRLIVL
WDDNRITIDG AVSLSSSEDV LARYAATGWH TVSCDGHDPD SINTALEAAK ADPRPSIVQC
TTVIGYGAPN KQGTSATHGA ALGVDEVAAA RGYLGWTAEP FVIPEDIKAA WAEAGHRGTA
TRSAWEARLV ASKDRAEFER RMAGALPAGF SLDAYIKELA ANPQKVATRK ASEMALGPIN
EQLPETVGGS ADLTGSNNTK TKGQAPLTAE DYAGRYIYYG IREFGMGCAM NGLALHGGVI
PYGGTFMVFS DYCRPAIRLS ALQQQRVVYV MTHDSIGLGE DGPTHQPVEH LMSLRAMPNL
DVYRPCDAIE TAECWQLALE KADGPSLLAL SREGLPQVRT DISENFSAKG AYRLKAAEAT
RKVVLIASGS EVEIALATAK KLEEAGHGAD VVSMPSWERF DAQPESYRDA ILPEGVLLVS
IEAGTTMGWE RYVGRKGLRF GVDGFGASAP VKALYDHFGL TADKLAPRII GALAN
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