| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2579 |
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| Symbol | |
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| ID | 5197621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2862884 |
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| End bp | 2863888 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640582135 |
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| Product | Type II secretory pathway component PulK-like protein |
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| Protein accession | YP_001263075 |
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| Protein GI | 148555493 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3156] Type II secretory pathway, component PulK |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0708012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACGG GAACCATATC TCCCCTCCCG CTTGCGGGAG GGGCCGGGGG TGGGTCTGCC
GCCGCCTGGT CGGAAGCGCG TCCCTTTCGG GCCGCGCGCC CACCCCTGAC CCCTCCCGCA
AGCGGGAGGG GGAAAGGAAG CGCGCCGCGC GTGGGCGAGG AGGGGATGAT CCTCGTCAAC
GTGCTGCTGT TCGTCGCGAT CGCGAGCGGC CTGTTGCTGC TGATGATCTC GGCCGAGGAC
AGCGGCCTCG AACGCGGCCT CAGGATGCGC GAGGCGGCGC GGGCGCAGGC GATCGCGCGC
GGCGGCGAGG TGTCGGCGGT GGTGGCGCTC CGCCGCGACG CGCTGGTCGC GCCCGACACC
GACAGTCGCG CCGAGCCCTG GGGCGCGCTC GCCGAATCGG GCGCGCCGAT CGAGGGCGGC
AGCTTCGACC TCGCCATCGC CGACGCGCAG GGGCGGTTCA ACGTCAACGC GCTGATGCAG
CCCGATCCGA TCGCGGCGGC GACGCTCGGG CGGATCGCCG GCGCGGTCGG GATGACGCCC
GAACAGTCGG CCCGGGCGGT CGCCGCGATC CGCGCCGCCG GGCCGCTGAC CGACATCCGC
CCGCTCGGCG CGCTCGGCCT CGCGCCGGGC CAGGTGGCGC GGCTTTCGGG GCTGCTGACC
GCGCTCCCCT ATGAGGGCAA GATCAACCTC AACGCCGCGA GCGAGGACCT GATCGGCATA
GTGACCGGCG ACCCGATGGC GGCGCGGCGG ATCGTCGCCC TGCGCGACCG GCAAGGCTAT
CTGACCGCCG CCGACCTCGC CTCGCTCGAC GTGTCGATGC CGCAGGGGAC GGGGCTCACC
TCCAACCTCT TCTGGGTACG CACCCGGGTG CGGATCGGCG ACACCAGCCA GCAGGTCACC
AGCCTGATCG CCCGCAAGGA CGACGGCCAG GGCGGCAAGA CCGCGGCGGT GGTCGGCCGC
TGGACCGGCG CCTCCGCGCC GTTGCAGGCG CCGCCCCTCC CCTGA
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| Protein sequence | METGTISPLP LAGGAGGGSA AAWSEARPFR AARPPLTPPA SGRGKGSAPR VGEEGMILVN
VLLFVAIASG LLLLMISAED SGLERGLRMR EAARAQAIAR GGEVSAVVAL RRDALVAPDT
DSRAEPWGAL AESGAPIEGG SFDLAIADAQ GRFNVNALMQ PDPIAAATLG RIAGAVGMTP
EQSARAVAAI RAAGPLTDIR PLGALGLAPG QVARLSGLLT ALPYEGKINL NAASEDLIGI
VTGDPMAARR IVALRDRQGY LTAADLASLD VSMPQGTGLT SNLFWVRTRV RIGDTSQQVT
SLIARKDDGQ GGKTAAVVGR WTGASAPLQA PPLP
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