| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2578 |
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| Symbol | |
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| ID | 5197620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2861166 |
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| End bp | 2862857 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582134 |
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| Product | peptidase M28 |
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| Protein accession | YP_001263074 |
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| Protein GI | 148555492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0256321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGG AGGATGGGTC TCGTAAGAGT CCATCCATGA AGATTCTCCC CATCGCCGCC
GCGCTCGCCG CGCTCACCGT CCAGCCCGCC GCCGCCAGGG TCGCGGCCGA TCCCGCCCGC
CTGACCGAGA CGGTGAAGAC CCTCGCCTCC GACCTGTTCG AGGGCCGCGC GCCCGGTACG
GCGGGGGAGG AGCGGACGAT CGGCTATCTC GTCGCGCGCT TCGAGGCGCT GGGGCTGGAG
CCGGGCGGGC CCGGCGGGCA GTGGGTGCAG AAAGTGCCGC TGCTCCACAC CCGGCTCGGC
ACGCCGAAGA CGCTGGGTTT CCAGGGGCCG AAGGGCGCGA TGCCGCTGGT GCCGGCGAAG
GACGTCTATG TCTCGACCGT CCGGCCCGAC GACGCCGCGC GGATCGCGAA CGCGCCGGTC
GTGTTCGTCG GCCATGGCGT CAAGGCGCCG GAGCGCGGCT GGGACGATTT CAAGGGCGCC
GACCTCAAGG GCAAGGTCGT CATCTTCCTG GTCAACGATC CCGATTTCGC CGCCCAGCCG
GGCGAGCCCG CGGCGGGCCG GTTCGGCGGC CGGACGATGA CCTATTATGG CCGCTGGACC
TACAAGTTCG AGGAGGCCGC GCGGCAGGGC GCGGTCGGCG CGCTGATCGT CCACGAGACG
GCGGGCGCGG GCTATGGCTG GAACGTGGTG ATCAGCGGCG GCGGCGAGAA TTACGACATC
GTCCGCAAGC CGGAGGAGCT GACCAGCGTC GCCCTGCAGG GCTGGCTGTC GGGCGAGGCC
GCCGCCCGGC TGTTCGCCTC GGCCGGGCTC GACCTGGCGA AGCTGTCGGT GGCGGCGCGG
TCGCCGAAAT TCCGGCCGGT CGAATTGAAG GGCGTGACCT TCGCCGCCGA CGTCCCCGTC
GCGCACGAGA CGGTGGCGAG CCGCAACGTG CTGGCGCGGC TGCCCGGCGC GAAGCGGCCC
GACGAGGTGG TGATGCTCGG CGCGCACTGG GACGCCTATG GCGCGGGCAA GCCCGACGCG
CAGGGCCGCA TCTACCGCGC CGGCGCCAAT GACGACGCGC TCGGCCTCGC CGGCCTGTTC
GAGATCGCCC GCGCGATGAA GGCGGGCCCC GCGCCCGACC GCAGCGTCGT CTTCGCCGCC
TGGACCGCCG AGGAGCGCGG CCTGCTCGGC TCCGAATATT ATGCGGCCAA CCCGGTCTAT
CCGGTCGAGA CGACCGTCGC CAACCTCGCC ATCGACATCC TCCAGACGGC GGGCCCGGCG
AAGGACGTCG TGCTGGTCGG CAAGGGACAG GGCACGCTCG AGGACGATCT GGCGCGGGTC
GCGGCGACGC AGGGGCGCAC GGTGACGCCC GAAAGCCTGC CGGAGCGTGG CCTCTTCTAC
CGCGCCGACC ATTTCTCGCT CGCCAAGCGC GGGGTGCCGG TGCTGCTGCT GATGGGGATC
GCCGGGGCCT CCGACCTGAA GGACGGCGGC GTGAAGGCGG GGCAGGCGTG GATCGATGCC
TATACCGGCC AATGCTATCA TCAGGCCTGC GACGCCTGGA GCGCCGACTG GAATCTCGCC
GGGGCGGTGG AAGACATCGA CCTGCTCGGC ACCATCGCCG AGGAGCTGGC GAACGGGCCG
GCCTGGCCGC AATGGAAGCC GGGGTCGGAG TTCAAGGCGA TCCGCGATCG GAGCGCGGCG
GCGCGGCGAT AA
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| Protein sequence | MTVEDGSRKS PSMKILPIAA ALAALTVQPA AARVAADPAR LTETVKTLAS DLFEGRAPGT
AGEERTIGYL VARFEALGLE PGGPGGQWVQ KVPLLHTRLG TPKTLGFQGP KGAMPLVPAK
DVYVSTVRPD DAARIANAPV VFVGHGVKAP ERGWDDFKGA DLKGKVVIFL VNDPDFAAQP
GEPAAGRFGG RTMTYYGRWT YKFEEAARQG AVGALIVHET AGAGYGWNVV ISGGGENYDI
VRKPEELTSV ALQGWLSGEA AARLFASAGL DLAKLSVAAR SPKFRPVELK GVTFAADVPV
AHETVASRNV LARLPGAKRP DEVVMLGAHW DAYGAGKPDA QGRIYRAGAN DDALGLAGLF
EIARAMKAGP APDRSVVFAA WTAEERGLLG SEYYAANPVY PVETTVANLA IDILQTAGPA
KDVVLVGKGQ GTLEDDLARV AATQGRTVTP ESLPERGLFY RADHFSLAKR GVPVLLLMGI
AGASDLKDGG VKAGQAWIDA YTGQCYHQAC DAWSADWNLA GAVEDIDLLG TIAEELANGP
AWPQWKPGSE FKAIRDRSAA ARR
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