| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2573 |
|---|
| Symbol | |
|---|
| ID | 5196359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2852212 |
|---|
| End bp | 2852916 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640582129 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_001263069 |
|---|
| Protein GI | 148555487 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0469336 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAGG ACGATGACGC GCCCCATGGC CTGCCCCGCC CCATTCGCGC TAGGCAGGCG
GTCGCCATGA CCGACCTGAT CTCCTCCGTC GCCGAGCATC TCAAGTCCCG CGGCGCACAA
AAGCTGCCCA GCGCCAAGGC CGAGCTGTTC ATGATCCGCG ACTTCCTGCC GGCGGAGACC
TGCGCCGAGC TGGTCGCGCT GATCGACCGC GACAACCGGC CCTCGACGAT CGCCGACGAC
CAGGGCATCG CCTATTTCCG CACCAGCAAG ACCTGCGACC TCGACCCGCG CGACGCGCTG
GCGCAGGCGA TCGACGCGCG GATCGCCGAC GCGCTGGGCA TCGACCCGCG ACTCGGGGAG
CCGATCCAGG GCCAGAAATA TGACGTCGGC GACGAGTTCC GCGACCATAC CGACACGTTC
GAGCCGACCG GCTTCGACTA TCTCGCCCAT TGCGGCGAGA CCGGCCAGCG GAGCTGGACG
GCGATGATCT ATCTCAACGA ACCCGCCGCC GGCGGCGCCA CCCGCTTCCG CCGGCTCGAC
AAGATCATCC CGCCCGAGCG CGGAAAACTG GTGGCCTGGG CCAATATCGA CCGGTCGGGC
CGGCCCAACG AGGCGACGTT GCATTGCGGG ATGAAGGTCC GCAAGGGCGC CAAATACGTC
ATCACCAAAT GGTATCGCGA ACGGCCCTGG CCCGAACGGG GCTAA
|
|---|
| Protein sequence | MLQDDDAPHG LPRPIRARQA VAMTDLISSV AEHLKSRGAQ KLPSAKAELF MIRDFLPAET
CAELVALIDR DNRPSTIADD QGIAYFRTSK TCDLDPRDAL AQAIDARIAD ALGIDPRLGE
PIQGQKYDVG DEFRDHTDTF EPTGFDYLAH CGETGQRSWT AMIYLNEPAA GGATRFRRLD
KIIPPERGKL VAWANIDRSG RPNEATLHCG MKVRKGAKYV ITKWYRERPW PERG
|
|---|
| |