Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2566 |
Symbol | |
ID | 5199023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2846711 |
End bp | 2847088 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582122 |
Product | histidine triad (HIT) protein |
Protein accession | YP_001263062 |
Protein GI | 148555480 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0453774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCG ACGCGACCCA GCCTTATGAC GACGACAATG TCTTCGCCCG CATCCTGCGC GGCGAGCTGC CGTCGCGGAA GGTCTATGAG GACGACTGGG CGCTCGCCTT CCACGACATC AACCCGCAGG CGCCGGTCCA CCTGCTGGTG ATCCCCAAGG GCCGCTACGT GTCGTGGGAC GATTTCACCG CCAGCGCGAG CGACGCCGAG ATCGCCGGCT TCGTCCGCGC CGTCGGCCAT GTCGCGCGCG AGGCGGGGCT GTCCGCGCCG GGCTATCGCC TGCTCGCCAA TGTCGGCGGC CACGGCCACC AGGAGGTGCC GCACCTCCAC GTCCACATCT TCGGCGGGCG GCAGTTCCAC GCAATGCTGG TGAACTGA
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Protein sequence | MPIDATQPYD DDNVFARILR GELPSRKVYE DDWALAFHDI NPQAPVHLLV IPKGRYVSWD DFTASASDAE IAGFVRAVGH VAREAGLSAP GYRLLANVGG HGHQEVPHLH VHIFGGRQFH AMLVN
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