Gene Swit_2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2566 
Symbol 
ID5199023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2846711 
End bp2847088 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content69% 
IMG OID640582122 
Producthistidine triad (HIT) protein 
Protein accessionYP_001263062 
Protein GI148555480 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0453774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCG ACGCGACCCA GCCTTATGAC GACGACAATG TCTTCGCCCG CATCCTGCGC 
GGCGAGCTGC CGTCGCGGAA GGTCTATGAG GACGACTGGG CGCTCGCCTT CCACGACATC
AACCCGCAGG CGCCGGTCCA CCTGCTGGTG ATCCCCAAGG GCCGCTACGT GTCGTGGGAC
GATTTCACCG CCAGCGCGAG CGACGCCGAG ATCGCCGGCT TCGTCCGCGC CGTCGGCCAT
GTCGCGCGCG AGGCGGGGCT GTCCGCGCCG GGCTATCGCC TGCTCGCCAA TGTCGGCGGC
CACGGCCACC AGGAGGTGCC GCACCTCCAC GTCCACATCT TCGGCGGGCG GCAGTTCCAC
GCAATGCTGG TGAACTGA
 
Protein sequence
MPIDATQPYD DDNVFARILR GELPSRKVYE DDWALAFHDI NPQAPVHLLV IPKGRYVSWD 
DFTASASDAE IAGFVRAVGH VAREAGLSAP GYRLLANVGG HGHQEVPHLH VHIFGGRQFH
AMLVN