Gene Swit_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2548 
Symbol 
ID5201000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2834450 
End bp2835103 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID640582104 
Productdisulfide bond formation protein DsbB-like protein 
Protein accessionYP_001263045 
Protein GI148555463 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.290105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCC CTCCCTGCAA GGGAGGGGTC AGGGGTGGGT CACGGAGACG AGGGGCTCGA 
CGCCCCTCGG CGGAGTTCCT TGGGACGACC GGGCAAGGCT CCCCTGAATC AAGTTCAGGG
TCGCCACCCA CCCCCTGCCC CTCCCTTGAA AGGGAGGGGG GTTCGGCTAT ACCCGCCCCC
ATGACCGGTT TCGCCCAGGC GCGGCTCGCC GCGCTCCTCC TGCCTTCGGC GCTGATGCTG
GGGGCGCTCG GCTCGCAGTT CATCGGCGGG CTCTTCCCCT GCGAGATGTG CCATTGGCAG
CGCTGGCCGC ACGAGGCGGC GATCGCGCTG GCGCTGTTCG CCTTCCCGCT CGGCGACAAG
CGATCGGGGC GGATCGTCCT CGCCCTGGCG ATCGTCGCGA TCCTGATCAG CGGCGCGATC
GGCGTCTTCC ATGCCGGCGT CGAATATCAT TGGTGGCAGG GCATCACCCG CTGCTCGGCC
CCGCCCAGCG GCGGGTCGGA GGGCGATCTG CTCGCCCAGA TCATGGCGAC GCCGATGATC
CAGTGCGACG TGCCGCAATG GACGCTGTTC GGCATCTCGC TCGCCGGCTT CAACGCGATC
TTCTCGATCC TCGGCGGGCT CGGCGCCATC GCGCTGTGGA AGCGCAAGCC ATGA
 
Protein sequence
MISPPCKGGV RGGSRRRGAR RPSAEFLGTT GQGSPESSSG SPPTPCPSLE REGGSAIPAP 
MTGFAQARLA ALLLPSALML GALGSQFIGG LFPCEMCHWQ RWPHEAAIAL ALFAFPLGDK
RSGRIVLALA IVAILISGAI GVFHAGVEYH WWQGITRCSA PPSGGSEGDL LAQIMATPMI
QCDVPQWTLF GISLAGFNAI FSILGGLGAI ALWKRKP