| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2523 |
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| Symbol | |
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| ID | 5197103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2804254 |
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| End bp | 2806893 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582071 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001263020 |
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| Protein GI | 148555438 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATT GTCCGCCCCG GCTGATCGAA CCGCTGGTCG CGCGCCCGCG TATCGCCCGG
CGGATGGCGG AGGCGGCCGG CAAGGTGACG CTGGTCGTCG GCCCGCCGGG CAGCGGCAAG
ACCTCGGCGC TCGCCAGCCA CCACGCCGAT CTCGCCGCCG GCGGCGCGGC GGTGCGCTGG
CTGACGCTGT CGGCCGAGGA CAATGACCCC GCTATCCTGC GCAGCCATCT CGACCACGCT
TTCCGGGGCG CTGGCGCGGA AGGACGGGAC GAAGGCGACG GCCTGTCCGA TCCGCCCGAG
AACATCGTCG GCTTCATCGA CGGTCTGGAG AAGATCGACG CCGCCCCGGC CCGCGCCCTG
ATCGGCGCCT TCGTCCTCGA ACTGCCGCCG AGCAGCAGCT TCCACATCAC CGCGCGCCGG
ATGAAGGGCG CGATGTTCCA CGACGGTTGG CTGCGCGGCG TCGTCGAGGT CATCGGCCCC
GACGAGCTGC GCATGACCGA CGACGAGGCG GCGGCGCTGC TCGGCGAGGC GTGGAGCCCC
TGGGATCGCC AGCGGATCAA CGAGGCGGTC GATGGCTGGG CCGCCGGGCT GCGCTTCGTC
GCCCGCGCGC CCCGCAGCGC GGAGCGGTTG CTGGACGGCA CGGGGGAGCG GCCCTTTCCG
GTCGAGATGG CCAATTATCT CGACGACGTC GTCTGCGCGC GGATGGACGC CGCCTCGCTC
GCCGCGTTGA TGGACGTCAG CGTGCTCGAT CGCTTCACCC CCGAGGCGCT GGCGGCGATG
CCCGGCCGGC CCTGCGACTG GGCGCAGATC GACGACCATA TTCGCGAGGG ATCGTTCATC
CGCTATGTCG ACGAGCAGCG CTGCTGGGCG GCGTTCCACC CGGTGTTCGG TCGGCACCTG
CGCCAGCGGC TGCGGCGCTT CGATCCCGAC CGGTTCGACG CGCTCAACCG TTTCGCCGCC
TCCTGGTTCG AAGCGAACGG CTTCGGCGCC GAGGCGATCC GCCACGCCGT CACCGTCGCC
GACTCGGCTT TCGCCGCGCG CGTCATCGAG AATGTCGGCG CGATCCATGT CGACCTGTGC
GACGGCCCCG ATGTCGGCCT GGGCGAGCGC GTCCCCGCGA CGCGCGCGGG CGAACTGCCG
CTGCTGTTCC TGGGGCAGAT CTATTTCGCG ATCCGGCGTG GGCGATCGGT CGAGGCGCGC
GCCGCGCTGG AGGAGGCGGG GCGGCAGACG CGCGGCTTCA CCCTGCTCGA TCGCGGCGCC
GACCCCGAAT CGATCCGCGG CTTCGCCCAG CTCATCGACA TGGTGCTCGA CGCCTCCGAC
GACCGGCCGA TCACCGAGCA GCGGCTCGCC GAGCTCGAAC GGGCGATGGA GGTGCATCGC
GGGGTGCGGC CGATCCTGTC GAGCGGCGTC GCCTGCATGC TGGCGCTCGC CTATCTCGAA
CTGTCCCGCT ACGCCGAGGC GGCGACGGTG TGCGGGATCG GCCTGCACGC GATGCACGAC
GTCAAGGACA GCCGGGTCTC GGTGTTCCTG CGCATCCACC AGGCCGACAT CGCGGTGGCG
CGCGACACGG TCGACAAGGC GGTGCTCTAC ATCGAGGACG CCCAGCGCAT CGCCCGGATC
GGCAGCGGCG TCGACAATTA CGAGGTGATC GCCACCCGCA TCCTGCGCGC CGGCCTCCAT
TATGAGAATA ACGAGCTCGA CGCCGCGCTG GCGCTGCTCG ACCCCAGCCT CCGCCAGCTC
GGCTCGATCA ACGCCTGGGT GCGGCTGTGC GCGTCGGGCT TCGGCACCGC CGCGGCGATC
GCCGGCATCC GCCACGGCAT CGACGCGGCC GAGGAACGGC TCCGCGCCGG CGAGGCGCTG
GCGCGCGAGC GCAACCTGCC GCGCCTGCTC CAGTTCATGG CGATCGCGCG GCTGCGCGAG
CTGACCCGCG CGGGCGAATG GCGGGCGGCG ATGGAGCATG TCGAGAGCCC CGGCTTCGCC
GGGCTGCTCG CGACCGACAG CCTGTCGCAC GCGGTGCTCG GCGTGCAGGT GCCGGCGATG
CTCGAAGTCG CCCGGCTGAT GATCGAGCTC GGCCGGCCGC ACGACGCGCA GGCCTGGCTC
GACCGGATCA ACAAGCCCTT CCTCGGCGAG GCCGACAGCC GCTTCCGCTT CACCTTCCGG
ATCATGGCGA TGCGCGCGGC CTACGGGATG CGGCGCTACA ATGCCGCGGT CGACCATATG
CAGGCGGCGG TCGAGCTGGC GAGCCATGCC GGGCTGGTGC GGCGCGCGCT CAACAATCGC
CAGCACCTGA CCGAAGTGTT CGACTGGTCG ATCCGCAACG GCCGCCACCT GCCCGCGCGG
ATCGGCGCCT ATGTCGACGA CGTGCTGCGC GGCGCCGACG GCACCGAGAG CGGCGCGACG
CTGCAGCAGA GCAGCCCGCG TCGCGGCGTC GAGCAGGCGC CCAACAATTT CACGCTCAGC
CCGCGCGAGA CCGAGATCAT CGCGCTGGTC GCCGAAGGCT ATATCACCAA GGAGATCGCG
GTCCGCCTCG GCATCTCCGA GGGGACGGTG AAGACCCACC GCAAGAAGAT CCACGAGAAG
CTGGGCGTCG CCAGCCGGTC GCAGGCGATC GCGCGGGCGC GCGACCTGCT GATCATCTGA
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| Protein sequence | MRYCPPRLIE PLVARPRIAR RMAEAAGKVT LVVGPPGSGK TSALASHHAD LAAGGAAVRW
LTLSAEDNDP AILRSHLDHA FRGAGAEGRD EGDGLSDPPE NIVGFIDGLE KIDAAPARAL
IGAFVLELPP SSSFHITARR MKGAMFHDGW LRGVVEVIGP DELRMTDDEA AALLGEAWSP
WDRQRINEAV DGWAAGLRFV ARAPRSAERL LDGTGERPFP VEMANYLDDV VCARMDAASL
AALMDVSVLD RFTPEALAAM PGRPCDWAQI DDHIREGSFI RYVDEQRCWA AFHPVFGRHL
RQRLRRFDPD RFDALNRFAA SWFEANGFGA EAIRHAVTVA DSAFAARVIE NVGAIHVDLC
DGPDVGLGER VPATRAGELP LLFLGQIYFA IRRGRSVEAR AALEEAGRQT RGFTLLDRGA
DPESIRGFAQ LIDMVLDASD DRPITEQRLA ELERAMEVHR GVRPILSSGV ACMLALAYLE
LSRYAEAATV CGIGLHAMHD VKDSRVSVFL RIHQADIAVA RDTVDKAVLY IEDAQRIARI
GSGVDNYEVI ATRILRAGLH YENNELDAAL ALLDPSLRQL GSINAWVRLC ASGFGTAAAI
AGIRHGIDAA EERLRAGEAL ARERNLPRLL QFMAIARLRE LTRAGEWRAA MEHVESPGFA
GLLATDSLSH AVLGVQVPAM LEVARLMIEL GRPHDAQAWL DRINKPFLGE ADSRFRFTFR
IMAMRAAYGM RRYNAAVDHM QAAVELASHA GLVRRALNNR QHLTEVFDWS IRNGRHLPAR
IGAYVDDVLR GADGTESGAT LQQSSPRRGV EQAPNNFTLS PRETEIIALV AEGYITKEIA
VRLGISEGTV KTHRKKIHEK LGVASRSQAI ARARDLLII
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