Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2517 |
Symbol | |
ID | 5197037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2795369 |
End bp | 2797798 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640582065 |
Product | TonB-dependent receptor |
Protein accession | YP_001263014 |
Protein GI | 148555432 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGAAGA CGACCATCTT GCTGGGAAGC GTGGCGCCGC TGGCGCTGGC GATGCTGGCG GTGCCGGCAC AGGCGCAACA GGACGCGGGG GCGCAGGGGA GCGCCGCCGA GGCGCCGACC GGCGGCGTCG AGGACATCGT CGTCACCGCG ACGCGCCGCG ACACCCGGCT GCAGCAGACG CCGATCGCGG TCTCGGCGAT CACCTCCAAC ACCATCCAGC AGATGGCCCC GCGCGACATC GGCGACCTCG CCGCCTTCGT GCCGAACTTC TCGGCCAGCC GCATCCCGAG CTTCAAGGCG GCGGCGTTCG CGATGCGCGG CGTCGGCACC ACCACGATCA TCCCGTTCAA CGACGCGCCG ATCGGCGTCG TCGTCGACGA CTTCGTGATG CCGTCGATCC AGACGCAGCT GCTCGACACG TTCGACATCG CCCAGATCGA GGTGCTGCGC GGCCCTCAGG GCACGCTGTT CGGCAAGAAC ACCACCGGCG GCGTCGTGGT GGCGCGCACC AAGCGCCCCG ACCTCGGCGC CTTCGGGGCG CAGCTGCGGG GCGAGATCGG CGATTTCGGC ACCCGCGTCG TCCAGGGATC GATCGACGTC CCGATCATCC AGGACGTGCT CGGCCTGCGC GTCGTCGGCA GCTACCGCCA TTCCGACGGC TATATGTATA ACAACGCCTG CTACGGCCCG ATCACGCCGG TCGCGACCAC CGCCTTCGCG CAATCCTATG CGGGGCGGAC CGGCTGCGGC GACGGCCGCG CGCTCGGCGG GGACGAGATG TTCAACGGCC GGGTCAAGCT GCTGTGGAAG CCGACGTCCG GCATCACCGC GCTGCTGCAA TATGAGATAG TGCGCGATTC GGGCGACGCG CCGGGGATCG TCAACCAGAC GCGGCCGGGC TTCGTCTTCT ACAATCTCGG CTTCCGCCCC GGCACCGGCA ACCCGCTCAA GCGCGCGGGC GCCAGCGACG GCGATTTCGG CTTCAACGAT TTCGACGCCG GCCAGGTCGT CAACAGCGAC GGCGTCTACG CCAATGTCGA TATCGAGATC GGGAAGGGGA CGCTGAGCTC GGTCACCGGC TACCGGTCGC AGCGGTCGCG CCTGCCGGGC AATTTCGCCG GCGCGGTCAG CCCGATCCGG CTGTGGGACG CGTCGCGCGA CGACAATCGC AAGACCTTCC AGCAGGAGCT GCGCTACGCG GTCGAGCTGT CCGACCGGAT CAACCTGGTC GCGGGCGGCT TCTACCAGCG CGACAAGGTC GACTTCTGCG TCGCCTCGCT GCTCGGCTAT CTCGACCTGC TGCGCGGCCC GTCGGCGGTC GGCAACTATG CCGACAATCC GCAGGTCGCC TGCAACAAGC AGCGCGCCAC CTCGACCGCG CTGTTCGCCG AGGCCAATTT CGAGCTGACC GACCGGCTGA CGCTGACCAC CGGCGGGCGC TACAGCTGGG ACAAGAAGCG CCTCGCCGCG CGGACCGCGG TGTTCGCGCA GCAGCTCGGC GGCGGGATCG ATCCGTCGGT CACCTGGCGA TCGTTCGACA GCCCGTTCGA CTATGGCGAT TTCGACCGCT ATCCCGCCGG CGTGCTGCGC GAGCGCGCGA GCTGGAAGGA GCCGACCTGG CGCGCCAGCC TCAGCTACAA GGCGTCGCCG CAATTCTTCA CCTATTTCAC CTATTCGCGC GGCTACAAGG CGGGCGGGTT CAACGAGCTG GGCACGTCGG GCGTGCCGCT GATCCAGGCT CAGCTCGCGC CCTATGACCC GGAGAAGGCG GATTCGTTCG AACTGGGCTT CAAGTCGGAC CTGTTCGACC GCAGGCTCCA GCTCAACATC GCCGGCTTCC ACGTCACCTA TGACGACGCC CAGCGCCAGC TGCTCTTCCC CTTCACGCGC AGCGACGGCA CCAGCTTCAG CGAGATCCGC TTCATCAACG CCGCCAAGAT CGAGGTGAAC GGCATCGAGG CGGAGGCGAC GCTGGTCCCC ACCGACGGGC TGACGCTGCG CGGCACGCTC GGCTATCAGG ACGGCAAGTA TAAGAGCTTC ACCTCGCCCA CCCCGACGGC GCGCAACCTG GTCGACGTGC CGCTCAACCG CACGCCCAAA TGGCAGGCGT CGGGCAGCGG CAGCTACGAC ATCCCGATCG GCGGCATCGG CCGGATCACG CTGTTCGGAT CGGTCACCTA TCAGAGCCGC AGCCTGTTCA ACTTCGACCT GAACAACCCC GCCAACGACG CCTATCTCGA CGCGCGCACC CTGTTCAACG CGTCGATCGG CTTCACCGAC GCCTCCGACC GCTATTCGAT CCGGCTGGTC GGGCAGAACC TCACCAACCA GCTCTACCTC ACCGGCGGAC AGACGGTGGG CCAGCTCTTC ACCCGCGAGA CCTATGGCGC GCCGCGCTAC GTTGCGGTCG AGCTCGGCGT GAAATTCTGA
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Protein sequence | MGKTTILLGS VAPLALAMLA VPAQAQQDAG AQGSAAEAPT GGVEDIVVTA TRRDTRLQQT PIAVSAITSN TIQQMAPRDI GDLAAFVPNF SASRIPSFKA AAFAMRGVGT TTIIPFNDAP IGVVVDDFVM PSIQTQLLDT FDIAQIEVLR GPQGTLFGKN TTGGVVVART KRPDLGAFGA QLRGEIGDFG TRVVQGSIDV PIIQDVLGLR VVGSYRHSDG YMYNNACYGP ITPVATTAFA QSYAGRTGCG DGRALGGDEM FNGRVKLLWK PTSGITALLQ YEIVRDSGDA PGIVNQTRPG FVFYNLGFRP GTGNPLKRAG ASDGDFGFND FDAGQVVNSD GVYANVDIEI GKGTLSSVTG YRSQRSRLPG NFAGAVSPIR LWDASRDDNR KTFQQELRYA VELSDRINLV AGGFYQRDKV DFCVASLLGY LDLLRGPSAV GNYADNPQVA CNKQRATSTA LFAEANFELT DRLTLTTGGR YSWDKKRLAA RTAVFAQQLG GGIDPSVTWR SFDSPFDYGD FDRYPAGVLR ERASWKEPTW RASLSYKASP QFFTYFTYSR GYKAGGFNEL GTSGVPLIQA QLAPYDPEKA DSFELGFKSD LFDRRLQLNI AGFHVTYDDA QRQLLFPFTR SDGTSFSEIR FINAAKIEVN GIEAEATLVP TDGLTLRGTL GYQDGKYKSF TSPTPTARNL VDVPLNRTPK WQASGSGSYD IPIGGIGRIT LFGSVTYQSR SLFNFDLNNP ANDAYLDART LFNASIGFTD ASDRYSIRLV GQNLTNQLYL TGGQTVGQLF TRETYGAPRY VAVELGVKF
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