Gene Swit_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2503 
Symbol 
ID5198199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2778967 
End bp2779488 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content65% 
IMG OID640582051 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001263000 
Protein GI148555418 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAC ATTCCGACGC ACCGAAGCGC GCTCGCGCCC CCAGGGACGG CGGCGAGGAC 
GGCTCGCCCG AAGGCATCGA ACTCAACCGG AAGATCATCG CCCTGCTCCA GCAGGACGGG
CGCATGGCCT ATTCGGCGAT CGCGGCGCAG GTCGGCGTGT CGGAGGGGAC GGTGCGCAAC
CGCGTCCGCC AGCTGCTCGA CGACAATGTC ATCACCATCC AGGCCGAGGC GCACCCCTAT
GCGCTGGGTT ACGAGTTCAA CGGGCTGACC TTCGTCAAGG TCGCCGCCGG CGTCCCGATC
GACGACGTCG CGAAGCGGCT CTCGGCGATC CCGGAGGTCT ATTACCTGAT CATGGTGCTG
GGCCGCTTCG ACCTGAGCAT CGCCACCTAC CACAAGTCCC AGGACGATTA TCGCGACTTC
CTGACCACCC ATTTCTACGG TCAGCCCGAT ATCGCCGGGA TCGAGAACAG CCTGGTCCTG
AAGGTCCACA AGATGAAGCT GCAATGGGAC CTGAACGGCT GA
 
Protein sequence
MPAHSDAPKR ARAPRDGGED GSPEGIELNR KIIALLQQDG RMAYSAIAAQ VGVSEGTVRN 
RVRQLLDDNV ITIQAEAHPY ALGYEFNGLT FVKVAAGVPI DDVAKRLSAI PEVYYLIMVL
GRFDLSIATY HKSQDDYRDF LTTHFYGQPD IAGIENSLVL KVHKMKLQWD LNG