| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2433 |
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| Symbol | |
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| ID | 5196168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2704024 |
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| End bp | 2706156 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581980 |
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| Product | AsmA family protein |
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| Protein accession | YP_001262930 |
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| Protein GI | 148555348 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.2026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.914727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGTCG AACCCCATCC CCCGATCGAG GTCCCCGAGG GGGCTTCCGA CAACGCTCCG
CAGCCGGCCC GGCAGCGGCG CGATCCCGCC AACTGGACGC TCGCCGCGGG CTTCGCGGTG
GTGGCGACGG TCATCGGCCT GGTCGTGCTG GCCTGGTTCG TCCTCTACGT CACCAAGGGC
CGCTTCCTGA AGCCGACCTT CGAGTCGGTC GCCAGCCGGA CGACCGAGCG GCAGGTGAAG
GTGGCGGGCG ATTTCCAATT CTATTTCGAC ATCATCGACG CCCGCTTCCT GGCCGACGGG
CTGACCATCT CCAACCCGAA ATGGACGACC CGGCCCCATT TCTTCGAGGC GCGCCACGTC
GCCGCCCGGA TCAAGACGAT CCCGCTGATC TTCGGGGAGC GGAAGGCCGA CTGGCTGGTG
CTCGACGGCG CCCGGGTCGA CGCCGAATGG GACGCGCGGA AGCGCAACAG CTGGACCTTC
GGCGATCCGA ACAGGAAGGG CGAGCCGTTC CGCTGGCCGA CGATCGCCCG CGCCCGGGTG
ACCGACAGCC AGGTCCGCTA CATCGATCCG GCGCTGCAAC TCCGCACCGA CGTCAAGGTC
GGCGACATCG CGGCCGGCGA CGCCCGCATC GCCGGCAAGG TGCCCTTCAC CGGCACCGGC
ACGCTGCGCG GCAAGCCCTT CACGATGGAG GGCGCGCTGC TCTCGCCCAA TTCGACGGTG
GCGTTCGGCA GGACCCGGTT CGCGATGCAC GCCCGGTCGG GGCCGACCCG CCTCGACCTC
GACGGCGTGC TGCCGGCGGC GACGCAGATC GAGGGATCGG ACCTCAACCT GAAGGTGCGC
GGCCCCAATA TCCGCCTGCT GTTCGACTTC CTCGGCGTCG CCGCGCCCGA CACCCGCGCC
TATTGGTTCA CCTCGAAGCT GACCAAGGCC GGCGGCGAAT GGCGCTTCAC CCGGATCAAC
GGCCGCTACG GCGCGAGCGA CCTGCACGGC CGCATGACGA TCAGCCTGCC GGGCGACCGG
CTGTTCCTCG ACGCAGTGCT CGATTCGAAC CGCGTCGACA TCATCGATGT CGGCCCGTTC
ATCGGCTATG AGCCCGAGGC GCTGGCGGCG AAGGGCGTGC AGGCGGCGGT CGCGCAGACC
GGCAGCACCC CGCGCATCCT GCCCGATGCG CCGCTCCGGA TCGACGCGAT CCGCAATTTC
GACGCCCATA TCCTCTACAC GGTGAAGGAT TTCCGGAATC CGAAATTCCC GATCAGCAAC
GTCGACCTGA CCTTCGACCT GAACAAGAGC CTGATGACGC TGTCGCCGTT CAGCTTCGAG
ATCGCCGGCG GCCACCTCGC CTCCGACATC GTCATCGACG CGCGGGTGCC GGCGGTGGTC
ACCGACTACG ACATCCGCCT GTCGCCGACG CCGATGGCGA AGCTGTTCGC GGGCTTCGGC
GTCCACCAGG CGGGAACCAC CGGCGCGATC AAGGCGCGCG TGCGGATGAA GGGCACCGGC
GACACGCTGC GCGACTCGCT CGCCACCTCG AACGGGCGGA TCGCGATCAT CCTGCCGCGC
GGCACCTTCT GGACGCAATA TATCCAGCTG TCCGAGTTCG ACGTCGGCGT GTTCGTGCAG
AAGCTGCTCC AGGACAAGCT CAAGAAGCCG GTGCAGATCA ATTGCGGCCT GCTCGGCTTC
ACGGTGCGCG ACGGCGTCGC CGCGGCCGAC CCGATCCTGA TCGACACCGA CAAGAACGTG
ATGACGGCGA AAGGCGGCTT CAGCTTCAAG GACGAGTCGC TCGACATGCG CTTCCGCGCC
GATTCCAAGA AATTCAGCCT GTTCTCCGGC CAGTCGCCGG TCGGCATCAA GGGCTATTTC
GCGCAGCCCG GCATCAACAT CATCAGCCCG CAACTGCTGG CGCGCGGCGG CGCGGGGCTC
GCGCTCGGCG CGGTGGCGAG CCCGCTCGCG GCGGTGCTGG CCTTCGTCGA CGTCGGCGAC
GCCAAGGCGG CCGCCTGCGG CCCGGTGCTG GCGGGCGCGC AGGCCAGCGC GATGCGGACC
ACGAAGGGGA AGCCGCGCAA GGACGTCGGC TCGGCCCGCG AGAACCGCCG CCAGGCCGGC
GACCGCAAGC AGCCCGACAA GCTGGGGATG TAG
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| Protein sequence | MVVEPHPPIE VPEGASDNAP QPARQRRDPA NWTLAAGFAV VATVIGLVVL AWFVLYVTKG
RFLKPTFESV ASRTTERQVK VAGDFQFYFD IIDARFLADG LTISNPKWTT RPHFFEARHV
AARIKTIPLI FGERKADWLV LDGARVDAEW DARKRNSWTF GDPNRKGEPF RWPTIARARV
TDSQVRYIDP ALQLRTDVKV GDIAAGDARI AGKVPFTGTG TLRGKPFTME GALLSPNSTV
AFGRTRFAMH ARSGPTRLDL DGVLPAATQI EGSDLNLKVR GPNIRLLFDF LGVAAPDTRA
YWFTSKLTKA GGEWRFTRIN GRYGASDLHG RMTISLPGDR LFLDAVLDSN RVDIIDVGPF
IGYEPEALAA KGVQAAVAQT GSTPRILPDA PLRIDAIRNF DAHILYTVKD FRNPKFPISN
VDLTFDLNKS LMTLSPFSFE IAGGHLASDI VIDARVPAVV TDYDIRLSPT PMAKLFAGFG
VHQAGTTGAI KARVRMKGTG DTLRDSLATS NGRIAIILPR GTFWTQYIQL SEFDVGVFVQ
KLLQDKLKKP VQINCGLLGF TVRDGVAAAD PILIDTDKNV MTAKGGFSFK DESLDMRFRA
DSKKFSLFSG QSPVGIKGYF AQPGINIISP QLLARGGAGL ALGAVASPLA AVLAFVDVGD
AKAAACGPVL AGAQASAMRT TKGKPRKDVG SARENRRQAG DRKQPDKLGM
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