| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2416 |
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| Symbol | |
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| ID | 5196208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2684885 |
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| End bp | 2686993 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581962 |
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| Product | amidohydrolase |
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| Protein accession | YP_001262913 |
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| Protein GI | 148555331 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0066037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0385776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGAC TGCTCCTCAA GACCCTGCTT CCCACCCTGC TGCTCGGCGC GTCGGCGACC
GCCTTCGCCG CCACCGAACG GCTGTCGATC GTCTCCAACG GCGAGACGGT CGGATCGATC
GTCGTCGAGG GCGAGGGCGA TCGGGCGACG GTCGACTACC GGGTCGACAA TAACGGCCGC
GGTCCCAAGC ATCGCGAGGA GCTGACCTTC GGCGCGGGCG GCATCCCCAC CGCCTGGACG
ATCAAGGGCA GCTCGCTGAT GGGCGGCACC GTCGACGAGA GCTATCGCTG GTCCGCCGGC
CGCGCGCAGT GGAGCAGCCA GGCCGACGCC GGCAGCGCCA AGGCGAAGCA GCCGCCGCTC
TACGTCGTCA ACGACGACAG CCCCTATGCG ATCTGGGTCT ATGCCCGCGC CGCATTGGCC
CAACCCGATC ACAGCATCGC CGTGCTGCCC TCGGGACGCA TTTCGCTCGA GCAGCTCAGG
ACACTGACGG TCGGCGAGGG CGACGCCGCG ACCGAGGTGA CGGCGTGGCG GCTGACCGGG
GTGCAGCTCA ACCCCAGCTA CCTGCTGCTC GACAAGGACC AGAAGCTGTT CGCGCTGTTC
GGCCCCGGCG CCGACGGCAC GACGATCCGC GCCGGCCATG AGGCGGCGGT GCCGATGCTC
GGCAAGCTCG GCGCCGAGCT GGAGACCGAG CGCGCCTTCC AGCTCCAGCA GAAGCTGGCG
CACCGCTTCG ACGCGCCGGT CCGCATCCGC AACGTCCGCC TGTTCGATCC CGCCGGCGGC
GCGCTGTCGC CGCTCTCGAC CGTCGTCGTC ATGCGCGACA CGATCACCCA GGTGATCGCC
GACGACCGGC TGCCCCCACC CGAGGACGAG GTGGTGATCG ACGGCGAGGG CGGCACCCTC
TACCCCGGCC TGCACGACAT GCATTCGCAC GCGACGCTGC CGTCGGGGCT GATGTACCTC
GCCGCCGGGG TCACCGCGAC CCGCGACATG GGCAACGACA ACGGCTTCCT GCAGGACCTG
CTGTCGAAGA TCGACGCCGG GCAGGTCGCC TGGCCGCGCA TCGTCCCCAA CGGCTTCATC
GAGGGGCGCA GCCCCTATTC GGCGCGCTTC GGCTTCATCC CCGCCTCGAT CGACGAGGCG
CTGAAGGACG TGCGCTGGTA CGCCGATCGC GGCTATGCCG AGATCAAGAT CTACAATTCG
ATGAACCCCG ACTGGGTCAG GCCGATCGCC GCCGAGGCGC ACCGGCTGGG CCTGCGCGTC
ACCGGCCATG TCCCCGCCTT CGACACGCCC GACCGGGTGA TCGCGGACGG CTATGATTCG
ATCGCGCATC TCAACCAGCT CATGCTCGGC TGGATATTGC GGCCCGAGGA GGACAGCCGC
ACCCCGCTGC GCCTGACCGC GATGGCGCGC GCGGGATCGC TCGACCTCGC CTCCGACAAG
ATCCAGGCCA CCGTGCGGCT GATGCAGCAG CGCGGCATCG CGCTCGACAC CACCGCCGTG
ATCCTCGAAC AGCTGATGAT GAGCCGGGCG CGGCAGGTGC CGATGGGGCA GGAGGATTTC
CTGTCGCACA TGCCGATCGG CTTCCAGCGC TATCGCAAGC GCTCCTTCGT CACGATCGCC
GACAAGGCCG AGGCCGACGC CTATCAGGCG GGCTACGACA AGATGCTCGC GACGATCGCG
ATGCTCCACA AGGCGGGCAT CCGCCTGCTG CCCGGCACCG ACGACGCGAC CGGCTTCTCG
GTCCAGCGCG AGGTCGAGCT CTATGTGAAG GCGGGACTGA CCCCGGCCGA GGCGCTGCGC
GCGGCGACGC TGGGGGCGGA GGAATTCCTC GGCCGGGCCG ACCGGCTCGG CAGCATCGCC
CGCGGCAAGC TCGCCGACCT GGTTCTGGTG CCCGGCGATC CGACGAAGGA CATCAGCGCG
ATCCGCCGGC CGCGCATGGT GATGAAGGGC GGGGCGATCT ACTTCCCGAC CGAGATCTAC
ACCGCGCTCG GCATCGCCCC CTTCACCACC GCGCCCGCGA TCCGGCCGGC GACGAAGGTC
GCCGCGCGCG CGGACGAGGG CGGCGACGCC GTCGGCTTCG GCTATGGGGA GCATGTCTAT
GCGGATTGA
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| Protein sequence | MNRLLLKTLL PTLLLGASAT AFAATERLSI VSNGETVGSI VVEGEGDRAT VDYRVDNNGR
GPKHREELTF GAGGIPTAWT IKGSSLMGGT VDESYRWSAG RAQWSSQADA GSAKAKQPPL
YVVNDDSPYA IWVYARAALA QPDHSIAVLP SGRISLEQLR TLTVGEGDAA TEVTAWRLTG
VQLNPSYLLL DKDQKLFALF GPGADGTTIR AGHEAAVPML GKLGAELETE RAFQLQQKLA
HRFDAPVRIR NVRLFDPAGG ALSPLSTVVV MRDTITQVIA DDRLPPPEDE VVIDGEGGTL
YPGLHDMHSH ATLPSGLMYL AAGVTATRDM GNDNGFLQDL LSKIDAGQVA WPRIVPNGFI
EGRSPYSARF GFIPASIDEA LKDVRWYADR GYAEIKIYNS MNPDWVRPIA AEAHRLGLRV
TGHVPAFDTP DRVIADGYDS IAHLNQLMLG WILRPEEDSR TPLRLTAMAR AGSLDLASDK
IQATVRLMQQ RGIALDTTAV ILEQLMMSRA RQVPMGQEDF LSHMPIGFQR YRKRSFVTIA
DKAEADAYQA GYDKMLATIA MLHKAGIRLL PGTDDATGFS VQREVELYVK AGLTPAEALR
AATLGAEEFL GRADRLGSIA RGKLADLVLV PGDPTKDISA IRRPRMVMKG GAIYFPTEIY
TALGIAPFTT APAIRPATKV AARADEGGDA VGFGYGEHVY AD
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