| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2408 |
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| Symbol | |
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| ID | 5196950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2677566 |
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| End bp | 2678201 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581954 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001262905 |
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| Protein GI | 148555323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.175148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAG GGGGCATGGT GAAGGGGGTT GCATCGGTCA TCGCGGGGAC GCTGCTCGGG
TCCGTGCCGG CGTTCGCCGC CGCGCCACCG GCGCCGGTCG CGGCGCCCGC GCCCGTGGCG
CCGGCGCCGC TCAAGCCCTA CCGGATCAAT CCGGGCGACG AGATCGAGAT CTATGTGTGG
GGCGACGAAC GCCTCCAGCG CGTGCTCAAG GTTCTGCCCG ACGGCAGCGT CTCCTTCCCG
CTGGTCGGGC GGATCGACGC GCTCAACAAG CTGCCCACCG ACCTGGAGGG GGTGATCGCC
GCCGGGCTGG CCGACCAGTA TCGCAACACC GTCCCGCGGG TGACCGTGTC GGTGAAGAAT
CCGAGCGGCC TCAGCTTCTC GGTCGCCGGC AAGGTGCGCG CGCCGGGCGC CTTCACCCCG
GGCCATTACG TCAACGTGCT GGAGGCGATC AGCGTCGCCG GCGGGCCGAC CGAGTTCGCC
GACCTCAGCC GGGTGAAGAT CTATCGCAAG CAGGGCTCGC AGATCCAGGT GATCGACGTC
CGGCTCGACA CGGCGATGAA GGGATCGCCG TCCGCCGCCG ACCTGCGCGG CGCGATCGTC
GAGCTGCAGA GCGGCGACAC CGTGGTGGTG CCATGA
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| Protein sequence | MRKGGMVKGV ASVIAGTLLG SVPAFAAAPP APVAAPAPVA PAPLKPYRIN PGDEIEIYVW
GDERLQRVLK VLPDGSVSFP LVGRIDALNK LPTDLEGVIA AGLADQYRNT VPRVTVSVKN
PSGLSFSVAG KVRAPGAFTP GHYVNVLEAI SVAGGPTEFA DLSRVKIYRK QGSQIQVIDV
RLDTAMKGSP SAADLRGAIV ELQSGDTVVV P
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