| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2405 |
|---|
| Symbol | |
|---|
| ID | 5196900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2673304 |
|---|
| End bp | 2674092 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640581951 |
|---|
| Product | phosphoesterase, PA-phosphatase related |
|---|
| Protein accession | YP_001262902 |
|---|
| Protein GI | 148555320 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.449401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGA TTGCCGCGGC CTGGACGCTG GCCGCGCTCG CCGGGACGGC CGGCATCGCG
CTCGCGGCGG CGCCGCAGGC GACGACCTTC CTCGATCCCG GCTATCTCGA CCTCGCCGAC
GTCATCCTGC CCGCGCCGAT CCCGCAGGAG CCGCGCGGCG TCGCCGACCG CGAGGTGTTC
AAGCTCACCC GCGCGCTGAA GGGGACGCCG CGCTGGGACA TGGCCGTCGC CGACGTGCCC
GGCGACACCG CGTCGATGAT GCGCGACTTC GGTTGCGCCA CCCGGATCGC CATGACCCCC
GTCAACGCGC CGAAGACGGC GGCGCTGCTC GAGCAGGCGT CGCGCGATGC GCGGGGCGAG
ACCAACAGGC TCAAGGCCTT CTACAAGAAG AAGCGCCCCT TCCTGATCGA TTCGGGGGAG
ACCTGCGAGC CGCAGACCGA CGAGCTGGCG CAGAGCTACG ACTATCCGTC GGGCCATGCG
ACGCGGGGCT GGACCTGGGG CCTCGTCCTG GCGGAGGTGC TGCACGAGCG GGCCGGGCCG
ATCCTGGCGC GTGCCCGCGC CTATGGCGAG AGCCGGATCG TCTGCGGCGT CCATAATATG
AGCGCGGTCG AGGCGGGCCG GATGGTCGCC TCCTCGACGC TGGCGGTGGT GCGCACCGAG
CGCGCCTATG CCGACATGGT GACGGCGGCG CGCGCCGAGC TCGCTACGTT GCCGAAGCGT
GACGACGCGG CTTCGGTGCA GGCCTGTTCG ACCGAGGAAC TGCTCGTCAC CCAGCCGATT
TTTCGCTGA
|
|---|
| Protein sequence | MKRIAAAWTL AALAGTAGIA LAAAPQATTF LDPGYLDLAD VILPAPIPQE PRGVADREVF
KLTRALKGTP RWDMAVADVP GDTASMMRDF GCATRIAMTP VNAPKTAALL EQASRDARGE
TNRLKAFYKK KRPFLIDSGE TCEPQTDELA QSYDYPSGHA TRGWTWGLVL AEVLHERAGP
ILARARAYGE SRIVCGVHNM SAVEAGRMVA SSTLAVVRTE RAYADMVTAA RAELATLPKR
DDAASVQACS TEELLVTQPI FR
|
|---|
| |