| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2378 |
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| Symbol | |
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| ID | 5198184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2643134 |
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| End bp | 2644879 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581924 |
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| Product | GMC oxidoreductase |
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| Protein accession | YP_001262875 |
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| Protein GI | 148555293 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAA GCAGATTGCA GGCTAACATC GCTTCACCCC TTCCCGCAGC CAGCCTATGC
GTGTGTAGGG TTCCAGGCCG GCTTGGAAAG TGGAAAGATG CCGAACGACG ACAGCCCTTC
GCTTTCCATC GATCGCCGCC TTGCCCTGGC CGGCGCGATG CTGATGGTCG CGCTCCCCCT
CGACCGCGCG GCAGCCGCCG GCCCCGTCGA CACGCTGCCG CCCCGGGACG ACGACGAATT
CCTGATGATC GACGGCTGGG TCCTGCGCCG CGACGACCTG GACCGTCGCG GCGGATGATC
ATCGACTTCA ACAGCGAGAC GCAGCGGATC GACGACCGCG TCTACGACGT GGCGATCGCA
GGCGGCGGCC CGGCGGGGAT CAGCATCGCG CTGGCGCTGG CGGCGGCGGG CCGGTCGGTC
GCGCTGATCG AAGGCGGCGG GCTCGACTTC AGCGAAGCCT CGCAGGCGAG CTATCAAGGC
AGCCAGTCGG GCGCCGCCTA CGGCCCGCTC GACGGCACGC GCCTGCGCTA TCTCGGCGGC
ACATCGAACC ACTGGACGGG CCGCTGCGGC GCGTTCGATC CGATCGATTT CGCGCCGCGC
CGCAACCGCA TCCTCCCCGG CTGGCCGATC GGGCGCGACG AGGTCTACCG TTTCGGAACG
CAGGCGCGGG CCATCCTCGA CCTGCCCCGG CCGCCGTTCC GGGCCACGCG GGCGACGCCG
CTGCCCAGCA AATATTTCCG CCTGACCGAA TTCGCGATGA GCCCGCCGAC CCGCTTCCTC
GGCAAATATC GCGAGCGGCT GCGCGCGGAC CGGCGGATCG ACTGCTACAT CAACGCCAAC
CTCGTCCGGA TCGGCGCGAA CCGGAGCGGC GGCCATGTCG ACGGCTATGA CGTCCGCAAC
TATCGCGGCG TCCGCCGCCG GCTGCGCGCG CATCGCTACG TGCTGGCGCT CGGGGCGATC
GAGAATGCCC GCATGCTGCT CAATGCGGAC GATGTCGTGC CGACCGGCCT CGGCAACGGC
TCCGGCATGG TCGGGCGCTG CTTCATGGAG CATCTCGACG TCAATCTCGG CAGCTTCGTG
ACGACCGACG AGCGCTTCTG GCGCGCGGGA CCGGTGGGCT TCAACCCCTC GGTGGCGCTG
ATGCGGCAGC AGGGGATCAG CAACGGCATC GTCTCGCTGA CGCCGTCGAT CAAGCCACGC
TATTACGGCC GGGCGGCTTT CCTGCGCGAG TTGATCAGCG GACCGGGCTG TCGGATCAAC
CCCGACTGGA CCCGCAAGAT CACCGGCTCC TATTGCCCCG GCGACAATAT CGTCACGTCG
ATGATCGAGC AGATCGCCAA TCCCGAGAGC CGGGTCAGGC TGACCGGAGA CCGCGACGCG
TTCGGCCTGC GCCGCATCGA CCTCCACTGG TCGATCCACC GCAACGACAT CGCGACGATC
GAGACGCTGG CGCGCGAGGT CGCCCGGGAT CTCGCCCGCA TGGACATCGC CCGGATGAAG
ATCGCGCCCG AGGTGCTCGG CCGCAGGATC ACCAGCTTCG GGGTCCAGTC GCACCATATG
GGCACGACCC GCATGTCGGC CGACCCGCGC TTCGGCGTGG TCGATGCGCG GCAGAAGGTG
CACGGCATCG ACAATCTCTA CGTCGCGGGG TCGAGCGTCT ATCCGACCGG CGGCGCGATC
AATCCGACCT TCACCCTGGT GGCGATGTCG CTGCGGCTGG CCGATCACCT GGCGACGACG
GCGTAA
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| Protein sequence | MGKSRLQANI ASPLPAASLC VCRVPGRLGK WKDAERRQPF AFHRSPPCPG RRDADGRAPP
RPRGSRRPRR HAAAPGRRRI PDDRRLGPAP RRPGPSRRMI IDFNSETQRI DDRVYDVAIA
GGGPAGISIA LALAAAGRSV ALIEGGGLDF SEASQASYQG SQSGAAYGPL DGTRLRYLGG
TSNHWTGRCG AFDPIDFAPR RNRILPGWPI GRDEVYRFGT QARAILDLPR PPFRATRATP
LPSKYFRLTE FAMSPPTRFL GKYRERLRAD RRIDCYINAN LVRIGANRSG GHVDGYDVRN
YRGVRRRLRA HRYVLALGAI ENARMLLNAD DVVPTGLGNG SGMVGRCFME HLDVNLGSFV
TTDERFWRAG PVGFNPSVAL MRQQGISNGI VSLTPSIKPR YYGRAAFLRE LISGPGCRIN
PDWTRKITGS YCPGDNIVTS MIEQIANPES RVRLTGDRDA FGLRRIDLHW SIHRNDIATI
ETLAREVARD LARMDIARMK IAPEVLGRRI TSFGVQSHHM GTTRMSADPR FGVVDARQKV
HGIDNLYVAG SSVYPTGGAI NPTFTLVAMS LRLADHLATT A
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