| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2374 |
|---|
| Symbol | |
|---|
| ID | 5199294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2637938 |
|---|
| End bp | 2639080 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 640581920 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001262871 |
|---|
| Protein GI | 148555289 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.222982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TGATCGCCTG GCTGATCGTC GCGCTGCCGG CGGTCGCGAC GCTGGTGCTG
GCGATCGAGC TGGCGGCGGC GCAGGCATCG CTCCGCCCGC CGCTCGCGCC GCGCGGCGAT
CCGCGCATCG CGATCGTCAT CCCCGCGCAT GACGAGGCGG CCGGAATCGC CGCCGCCGTC
ACCGCCGCGC GCGCCGCAGC GCCGCCCGGC GCCCGGCTGC TCGTCGTCGC CGACAATTGC
GCCGACGACA CCGCCACCCG CGCCCGCGCC GCCGGGGCGG AGGCGATCGA ACGCGACGAC
CCCGACCGGC GCGGCAAGGG CTTCGCGCTC GCCTTCGCCC GCGACCATCT CGCCGCCGCC
CCGCCCGATG TCGTCGTCGT CGTCGACGCC GACTGCACGG TGGCGGACGA CGGCATCGCC
CGGCTGGCCG CCGCCGTCCA GGCGCAAGGC CGGCCGGTCC AGTCGACCTA TCTGATGCGG
CCCGCTCCCG ATCGGGGAAC GCTGGTCGCG CTGTCGGGCT TCGCCTTCCT CGTCCGCAAC
CTCGTCCGGC AGCGGGGCCT CGCCCGGCTC GGCGCGCCAG CGCTGCTGAC CGGATCGGGC
ATGGCCTTTC CCTGGGCGGC CTTCGCCGCC GCCCCGCTCG CCACCGACGA CCTCGCCGAG
GACCTGGCGA TCGGCATCGC CCTGACGCGG CAGGGCTTCC CTCCCGCCTT CCTGCCGCAG
GTCGCGACCT GGTCGGACCC GGCGCGGCGC GACGCCACCC GCGCCCAGCG GACGCGCTGG
GAGCAGGGCT TCCTCCGCGC CGCCCGCGCC GCCGCCCTGC CGCTGATCGC CGCCGGGCGC
TGGCCGCTCG CGTGGCTCGG CCTCCACCTG CTGGTGCCGC CGCTGGCGCT GCTCGTGGCA
GCCGACGGCG CGGTGCTGGC GTTGCTCGCC CTGCTGGGAT CGTCCGCGCC CTTCGCGCTG
CTGGCGACGT TGCTCGGCGC GACGGGCGCG CTGCTGCTGC TCTGCTGGTG GCGGTTCGGG
CGCGACCAGC TATCGGCGGG ACGGCTGCTG CTGATCCCCC TCTATGTGGT GTGGAAGCTG
CCGCTCTACG CCGCCGCCGC GCTGCGACCC GAGCGGCGCT GGATCAGGAC CGACCGCGAC
TGA
|
|---|
| Protein sequence | MTDLIAWLIV ALPAVATLVL AIELAAAQAS LRPPLAPRGD PRIAIVIPAH DEAAGIAAAV
TAARAAAPPG ARLLVVADNC ADDTATRARA AGAEAIERDD PDRRGKGFAL AFARDHLAAA
PPDVVVVVDA DCTVADDGIA RLAAAVQAQG RPVQSTYLMR PAPDRGTLVA LSGFAFLVRN
LVRQRGLARL GAPALLTGSG MAFPWAAFAA APLATDDLAE DLAIGIALTR QGFPPAFLPQ
VATWSDPARR DATRAQRTRW EQGFLRAARA AALPLIAAGR WPLAWLGLHL LVPPLALLVA
ADGAVLALLA LLGSSAPFAL LATLLGATGA LLLLCWWRFG RDQLSAGRLL LIPLYVVWKL
PLYAAAALRP ERRWIRTDRD
|
|---|
| |