| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2315 |
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| Symbol | |
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| ID | 5200136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2575518 |
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| End bp | 2576135 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581861 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_001262812 |
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| Protein GI | 148555230 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.566047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0819697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCCCT TCACCCGTCT CGACGCGATC GCCGCCCCGT TGCCGGTCGC CAATGTCGAC
ACCGACAAGA TCCTCGCCGG CCGCTTCCTC AAGACGACGA CGCGCGAGGG GCTGGGCGAC
AAGCTGTTCT GGGCGCTGCG CCGGGACCCC GGCTTCGTGC TCAACCGCGC GCCGTGGGAC
CGCGCGGGCA TGCTGATCGC GCGCGACAAT TTCGGCTGTG GATCGAGCCG CGAACATGCG
CCCTGGGCGC TGCTCGACTT CGGGATAAGC TGCGTCGTCG CGCCGAGCTT CGCCGACATC
TTCTACAACA ACTGCTTCAA GAACGGCCTG CTGCCGATCG TCCTGCCGGA GGCGGAGGTC
GAGCGGCTGC TGCGGCTGGC GGCCGATCCG GCGACCGCAC GGATGACGGT CGACCTGCCG
GCCCAGACCA TCGCGGCCGG GGACGCGGTG ATCCGCTTCG CCATCGATCC CCGGCGCAAG
CAGGACCTTG TCGAGGGGAT CGACGAGATC GCGGCGACGC TGGCCCATGG CGACGCGATC
GCGCGGTTCG AGGCGCGCAC CGCGGCGGCG ATGCCGTGGG TCGAGGGCGT GGCGGAGGAA
GTGCTGGCGG CGGACTGA
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| Protein sequence | MQPFTRLDAI AAPLPVANVD TDKILAGRFL KTTTREGLGD KLFWALRRDP GFVLNRAPWD
RAGMLIARDN FGCGSSREHA PWALLDFGIS CVVAPSFADI FYNNCFKNGL LPIVLPEAEV
ERLLRLAADP ATARMTVDLP AQTIAAGDAV IRFAIDPRRK QDLVEGIDEI AATLAHGDAI
ARFEARTAAA MPWVEGVAEE VLAAD
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