| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2312 |
|---|
| Symbol | |
|---|
| ID | 5200133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2572108 |
|---|
| End bp | 2573322 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640581858 |
|---|
| Product | acyl-CoA dehydrogenase type 2 |
|---|
| Protein accession | YP_001262809 |
|---|
| Protein GI | 148555227 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0231485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCAG AGGCGCAGAT CAAGAGCGGG ACCAGCGGCG AGACCCGTGT GAAGGGGGGC
GGGGCGAGGG GCGTCCCGTC CCACGCCGAC TGCGTCGCCA TGGCGGAGGA GCTGGCTCCC
CGGCTGGCGC CGTTCGTCGA CGAGGCCGAG CGCTCCCGGC GGGTGCCCAA GGGCGCGGCC
GACGCGCTGA TCGCGTCGGG GCTGATGCCG CTGGTGCGCC CGGCCCGGCA CGGCGGCTAT
GAGCATGGCT GGATGGCCTA TGCCGACGTG CTCGCCCCGA TCGCGCGGCA ATCGGGCTCG
CTCGCCTGGG TGCTGGGCTT CCTGCTCCAC CACCAATGGG CGCTGGGCTT CTTCCCGCAG
GCGACCCAGG ACGAGGTCTA CAGCCAGGCC GCCGATCCGT GCATCGCGTC GATGTTCGCC
CCGTCCGGCC GGGCGACGGC GGAGGGGAGC AAGCTGCGGC TCACCGGCGA ATGGTCCTTC
TCCTCGGGGA TCGACAATTG CGACTGGGTG ATGCTGGCCG GCTTCGCCGA GATCGCGCCG
GGCGAACCGC CGATCAATTG CTGGTTCCTG CTCAAGCCCG GCCAGTTCGA GGTGCGCGAC
ACCTGGCACG CGGTCGGGCT GAGCGGCACC GGATCGAACA ATGTCGTGGT CCGCGACGCG
CTGATCGACG CGGATTATTG GGTCCGCGCC GATCCCTTCG GCGGCGACGA CATGAGCGCG
CGCAGCGGCA ATCGCGGCAT CCGCTTCGTC ACCCCGCCGG TCGGCCAGTT CCAATATGGG
CTGGTCGCGC CGATGATCGG GATCGCGATG GCGCTGCACG AGGAGGTGCT GCGCTTCAAC
GCCGGGCGGC AGGGCCTGCT GATTCCCGGC AAGATCGCCG ACGATCCCTT CCTCCAGGCG
GGGCTAGGCG AGTCCGAGGC CGAGCTGGCG GCGGCCTATG CGGCGATGAG CAAGCTCGAC
GACGCGATCG CGGCGGGCGA GATGCGCACC CCCGACGGGA TTGCGCGCTT CCGGGCGGGG
ATGGGCTTCG TCGCCAAGAC GATCACCGCC GCGTCGGAAC GGCTCTTCTA CCTGAGCGGC
GGGCGCGGGC TCGACAGCCG CAAGCCGCTG AGCCGCCACT GGCGCGACCT GCACGCGATC
ACCAACCATG CCGCGCTCAA ATATGAGATG ATGTTCCAGG GCCTCGGCCA GGCGGCGCTC
GCCCGCGTCA GCTGA
|
|---|
| Protein sequence | MSPEAQIKSG TSGETRVKGG GARGVPSHAD CVAMAEELAP RLAPFVDEAE RSRRVPKGAA
DALIASGLMP LVRPARHGGY EHGWMAYADV LAPIARQSGS LAWVLGFLLH HQWALGFFPQ
ATQDEVYSQA ADPCIASMFA PSGRATAEGS KLRLTGEWSF SSGIDNCDWV MLAGFAEIAP
GEPPINCWFL LKPGQFEVRD TWHAVGLSGT GSNNVVVRDA LIDADYWVRA DPFGGDDMSA
RSGNRGIRFV TPPVGQFQYG LVAPMIGIAM ALHEEVLRFN AGRQGLLIPG KIADDPFLQA
GLGESEAELA AAYAAMSKLD DAIAAGEMRT PDGIARFRAG MGFVAKTITA ASERLFYLSG
GRGLDSRKPL SRHWRDLHAI TNHAALKYEM MFQGLGQAAL ARVS
|
|---|
| |