| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2307 |
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| Symbol | |
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| ID | 5200054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2567053 |
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| End bp | 2567937 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581853 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262804 |
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| Protein GI | 148555222 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0089985 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGATCT CGCTTCACGG CCGGGTGGCC GTCGTCACCG GCGCCGGCAA CGGCCTCGGC
CGCTCGCACG CCCTGGCGCT GGCGGCGCAC GGCGCCCGCG TCGTCGTCAA CGACCTGGCC
GAGGCCGACG CCGAGCGCGT CGCCGCCGAG ATCCGCGCGG CGGGCGGCGA GGCGATCGGC
GTCGCCGCGA GCGTCACGGA CGCCGGGCAG GTCGCGGCGA TGGTCGAGCG GGCGATCGGC
GAATGGGAGG CGATCGACAT CCTCGTCAAC AATGCCGGCA TCCTGCGCGA CAAGAGCTTC
GCCAAGATGG ACCTCGCCGA TTTCCGGCTG GTCGTCGACG TCCACCTGAT GGGCGCGGTC
CACTGCACCA AGGCGGTGTG GGACCATATG CGCGCGCGCA ACCACGGCCG GATCGTCTTC
ACCACTTCGT CGTCCGGGCT CTACGGCAAT TTCGGGCAGG CCAATTACGG CGCCGCCAAG
ATGGCGCTGG TCGGGCTGAT GCAGACGCTG GCGATCGAGG GGGCGAAGAA CGGCATCCAC
GTCAACTGCA TCGCCCCGAC CGCCGCGACC GCGATGACCG CCGACATCTT CGACGAGACG
ACCCTCGCCC GGCTGACCCC GGACCGGGTG AGCCCCGCGA TCGTCATGCT CGCGTCCGAC
GCGGCGCCGA CCCGGCGGGT GATCCTGGCC GGTGCGGGCA GCTTCGAGCA GGCCAATATC
ACGATGACGC AGGGCCTGTT CCTCGGCGCC GAGGACGACG TCGCGGGCGC GCTGCTCGAC
CGGCTCGACG GCGTCGCGGA CCGCGCGGGC GAGCTGGTGC CCGGAACCGG CTTCGACCAG
TGCCGCCACG AGATCGCGGC GGCAAGCGTG ACCGTGGGGG CTTAG
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| Protein sequence | MSISLHGRVA VVTGAGNGLG RSHALALAAH GARVVVNDLA EADAERVAAE IRAAGGEAIG
VAASVTDAGQ VAAMVERAIG EWEAIDILVN NAGILRDKSF AKMDLADFRL VVDVHLMGAV
HCTKAVWDHM RARNHGRIVF TTSSSGLYGN FGQANYGAAK MALVGLMQTL AIEGAKNGIH
VNCIAPTAAT AMTADIFDET TLARLTPDRV SPAIVMLASD AAPTRRVILA GAGSFEQANI
TMTQGLFLGA EDDVAGALLD RLDGVADRAG ELVPGTGFDQ CRHEIAAASV TVGA
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