| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2305 |
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| Symbol | |
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| ID | 5200171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2565101 |
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| End bp | 2566051 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581851 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001262802 |
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| Protein GI | 148555220 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0089985 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCTCA GCCTGACGCA ATTCGATCTC AACCTGCTCG TCGTTCTCGA CGCGCTGCTG
ACCGAGAAGA GCGTGACCCG CGCCGCCGAG CGGCTGTTCG TCACCCAGCC GGCGGTCAGC
GGATCGCTCG CCCGGCTGCG CGACATCTTC GAGGACCCGC TGCTCGTCCG CGTCGGGCGG
GAGATGGAGC TGACCGTGCG GGCGCGGGCG CTCGCCGGTC CGGTGCGCGA GGCGCTGCTG
ATGGTCAAGG CCGCGCTGGG CAGCGAGGAG AGCTTCGACC CGGCCGAGAC GAAATGCGAA
TTCCGCATCG CCATGACCGA CTATTGCTCG ATGACGATCC TGCCCCGGAT CGTGCGCGAG
CTGTCTGCCC GCGCGCCGGG AATCGAGCTG GCGGTCGAGG GGCTGGTGAA CAAGAGCTTC
GACCGGCTCG AGACCGGCGA GATCGACTTC CTGCTCACCG TGGTCGAGCG CACCCTGCTG
ATGCATTCGC GCCATCCCGA CATGCTGCGC GGCGCCGACG CCTTCGAGGA TTGCTACACC
TGCGTCGTCG CCGCCGACCA TCCGTTCGAC GGCGCGCTGA CCCCGGAGGA TTTCCGCGCC
TATCCCAACG CCACCGTCTC GTTCGGCGAG AACACCTTCA CCACCGACCG GGCGGCCTAT
GAGCATGGTG GGCTCGACCA GTCCCCCGCG CTGATCGCGC CGAGCTTCTC GTCGCTGCTG
TTCCAGCTTC AGGGCACCAC GCTGATCGGC ACCGTGCCCA ACCGGCTGGC CGAGATGTTC
GCGCCGATGC TGGGGGTGCG GCTGCTCGAA CCGCCGATCC GCCTGCCGAC CCTCACCGAA
CGGCTCAACT GGCACGTCCG CAGCGACGCC GACCCCGGCC ATAGCTGGAT GCGCAACCTG
ATCCTCGACG TCGGCCGCTC GATGGGGCCG CGCAAGGGCG CGCCGGCCTG A
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| Protein sequence | MALSLTQFDL NLLVVLDALL TEKSVTRAAE RLFVTQPAVS GSLARLRDIF EDPLLVRVGR
EMELTVRARA LAGPVREALL MVKAALGSEE SFDPAETKCE FRIAMTDYCS MTILPRIVRE
LSARAPGIEL AVEGLVNKSF DRLETGEIDF LLTVVERTLL MHSRHPDMLR GADAFEDCYT
CVVAADHPFD GALTPEDFRA YPNATVSFGE NTFTTDRAAY EHGGLDQSPA LIAPSFSSLL
FQLQGTTLIG TVPNRLAEMF APMLGVRLLE PPIRLPTLTE RLNWHVRSDA DPGHSWMRNL
ILDVGRSMGP RKGAPA
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