Gene Swit_2276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2276 
Symbol 
ID5199182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2532255 
End bp2532626 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content76% 
IMG OID640581822 
Producthypothetical protein 
Protein accessionYP_001262773 
Protein GI148555191 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.501265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA CCGGACCCGA GCGCCACTGG CGCGCCGCGC TCGCCGAGGG GCGCTTCCTG 
CTCCAGCGCG CCCGCGCCAG CGGCACCGTC TTCTTCCCGC CCCGGCTGAT GGAGCCGGGC
AGCGGCGACG ACGAGTGGGA CTGGATCGAG GCGAGCGGCC TCGGCACCGT CCACGCCGTC
ACCGTCATCC ATCCCAAGCC GCCGCAGCCG CCGCGCGCGG TGGTGCTGGT CGACCTCGAC
GAGCAGGTGC GGCTGATGAG CGAGGTCGAG GGCGTTCCCG CCGAGGCGAT CGCGATCGGC
CTGCGCGTCC GCGCGCGGAT CGGCGAGCGC GACGGCGCCC CCATCCTGCT GTTCGACGCG
GCGGGGGCCT GA
 
Protein sequence
MSATGPERHW RAALAEGRFL LQRARASGTV FFPPRLMEPG SGDDEWDWIE ASGLGTVHAV 
TVIHPKPPQP PRAVVLVDLD EQVRLMSEVE GVPAEAIAIG LRVRARIGER DGAPILLFDA
AGA