| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2269 |
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| Symbol | |
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| ID | 5199774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2525201 |
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| End bp | 2526211 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581815 |
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| Product | transketolase, central region |
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| Protein accession | YP_001262766 |
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| Protein GI | 148555184 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCA TGACCATCCG CGATGCCATC CTCCAGACGC TCCATGCGGA GATGGAACGC
GATCCCGACA TCATGCTGCT CGGCGAGGAC GTCGTCGGCG GCAACGGCAC CGCCGGCGGG
CCCGAGGCGA TCGGCGGCAT CTGGGGCACG TCGGGCGGCC TCTATGCCAA GTTCGGCCCT
GAGCGGGTGA TCGACACGCC GATCTCCGAA AGCGCGATCG TCGGCGCGGC GGCCGGCGCG
GCGCTGGCCG GCAAGCGCCC GGTGGCGGAG CTGATGTTCG CCGATTTCGT CGGCGTCAGC
CTCGACCAGA TCTGGAACCA GATCGCCAAG TTCCGCTACA TGTTCGGCGG CAAGACGCGC
TGCCCGGCGG TGATCCGCCT GGTCTACGGC GCGGGCATGA ACACGGCCGC CCAGCACAGC
CAGTCGGTCT ATGCGATGCT GACCGCGATG CCGGGACTGA AGGTGGTACT GCCCGCGACC
CCGGCCGACG CCAAGGGGCT GCTGACCGAG GCGCTGCGCG GCGACGACCC GGTGATGTTC
TTCGAGCACA AGACGCTCTA CGGCGTGAAG GGTGAGGTGC CCGATGGCGA CCACCGCCAG
CGCTTCGGCG AGGCGCGGAT GGTGCGCGAG GGCGGCGACG CGACGATCGT CACCTGCGGC
CGGATGGTCA ATTTCTCCGA GAAGGCGGCC GACAAGCTCG CCGCCGACGG GATCGGCTGC
GACGTCATCG ACCTGCGCAC CACCAGCCCG CTCGACGAGG AGGCGATCCT GGACTCGGTC
GAGGCGACCG GCCGGCTCGT CGTCGTCGAC GAAAGCCCGC CGCGCTGCAG CCTCGCCGCC
GACATCTGCG CGCTGGTCGC GACCAAGGCC TTCTCCAGCC TGAAGGCGCC GCCCGAGATG
GTCACCGGCC CGCACAGCCC GATCCCCTTC GCGCGCGAGC TCGAACGCGC CTGGGTGCCG
TCGCCGCAGA AGATCGAGGC CGCGGTCCGC CGCGCCCTCG CCGCCGGCTG A
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| Protein sequence | MAIMTIRDAI LQTLHAEMER DPDIMLLGED VVGGNGTAGG PEAIGGIWGT SGGLYAKFGP
ERVIDTPISE SAIVGAAAGA ALAGKRPVAE LMFADFVGVS LDQIWNQIAK FRYMFGGKTR
CPAVIRLVYG AGMNTAAQHS QSVYAMLTAM PGLKVVLPAT PADAKGLLTE ALRGDDPVMF
FEHKTLYGVK GEVPDGDHRQ RFGEARMVRE GGDATIVTCG RMVNFSEKAA DKLAADGIGC
DVIDLRTTSP LDEEAILDSV EATGRLVVVD ESPPRCSLAA DICALVATKA FSSLKAPPEM
VTGPHSPIPF ARELERAWVP SPQKIEAAVR RALAAG
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