| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2264 |
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| Symbol | |
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| ID | 5198631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2518706 |
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| End bp | 2521183 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640581810 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262761 |
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| Protein GI | 148555179 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.249992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC GACATTGGTA TGTGGGTAGT GCGTGCGCGG CGCTCGCGGC GGCGCTGACG
GCGGTTCCGG CGCTGGCGCA GTCGGCGCCC GCCGAGACGG CGGAGACGGC GTCGGACGGC
GGGCTTCAGG AGATCGTCGT GACTGCGACG CGGCGCGACT CCAACCTCCA GTCGACCGCG
ATCGCGATCT CGGCCGTCGA CGAGAATCTG ATCCGGCAGG CGAGCCCGCG CAACGTCGGC
GACCTCGCCG CCTTCGTGCC GAACTTCTCG GCGGCGACGA TCACCAATTT CAACGCGGCG
TCCTTCTCGA TCCGCGGCGT CGGCCAGAAC AGCATCATCG TCTATTTCGA GCCGCCGGTC
GCGGTGCTGG TCGACGATTT CGTCATGCCG TCGGTGCAGA CCCAGCTGCT CGACACCTTC
GACGTCTCGC AGGTCGAGGT GCTGCGCGGG CCGCAGGGCA CGCTGTTCGG CAAGAACACC
ACCGGCGGCG CGGTCGTCGT CAAGACCAAG CGGCCCCAGC TCGAGAAGAT CGAGGTCGAG
GGCCGGCTCC AGGTCGGCGA CTTCGGCACG GTGATCCCGC AGGCCTCGTT CAACCTGCCG
ATCGGCCAGA CGCTCGCCTT CCGTGGCGTG ATCGGCCACA CCCAGTCGGA CGGCTATTAC
AAGAATGGCG GCTGCTTCGG CCCCGTCACC CCCTTCGCCG CCACTGCCTT CGCCGCCAAG
TTCGCGGGGC AGAGCGGCTG CGGCGACGGC CGCTCGCTCG GCGGGCAGGA CGTGTGGAAC
GCCCGCGCCA AGCTGCTGTG GGAGCCGAGC GACGCGTTCA GCGCGCTGCT CCAGTACGAA
TATCTGCGCG ACCGGTCGGA CAGCGTCCCC TCGGTCAACC TGACCCCGGC GTCGAACGGC
TTCCTGTTCC ACTCGCTCGG GCTCGGCTCG GTGCCGAACC GCAACAGCGA TCCGCTCAAG
AACGCCGCGC TGACCGACCG GCAGGCCGCG CTGATCAAGG AGAAGAGCGG CCAGATCGTC
AATGTCGACG GCGTCTACCT GAACATGGAC TACAAGACCG ACTGGGGCAC CTTCACCTCG
GTCAGCGGCT ATCGCAACCA GCGGTCGCGC CTGCCCAACA CCTATATGGG CACCGCGCCG
GTCGCGTCCG ACGGCACCGT CCTGTCGCTG TTCGACGCGC AGCGCGACGA CAACCGCAAG
ACCTATCAGC AGGAACTGCG CTTCGCCTCC TCGTTCGACG GGCCGTTCAA CTTCGTCGCG
GGCGGCTTCT ACCAGAAGGA CAAGACCAGC TTCTGCGTGG CGCAGCTGCT CGGCTTCCTC
GACCTCGCCA GCGGCGGGCC GGGCTTCGGC AACTGGAACG ACAATCCCTA TCTGCTGTGC
AACGCGCAGC GCTCCCGCTC GAAGGCGACC TTCGTCGAGG GCACCTTCAA GTTCACGCCG
ACGCTGACCC TGACCGGCGG CTTCCGCTAC ACCTGGGAGA ACAAGAGTTG GTACGGCCGC
CAGCAGGTGT TCGCGCAGCA GCTCGAGGGC GGGTTCGATC CGTCGATCGT GCTGGAGAAT
GCGCTCGACG CGAACGTGTT CGACTATACC GCCGGCGTCA TCAAGGTGAA GGACAGCGCC
CGCGAACCGA CCTGGCGCGT CAGCCTCGGC TGGCAGGCGA CGCCGACCGT CTTCGCCTAT
GCGACCTATT CGCGCGGCTT CAAGGCGGGC GGCTTCAACG ACCAGATCGG CAGCTTCCAT
CCCTTCGTCA ACGCCGACGG CAGCGACAAT CCGGCGGCCT TCGCGGCGGC GGCCTCGGCC
ACCAAGCCGG AGCGCGCCGA CAGCTACGAA GCGGGCGTGA AGACCGAACT GTTCGACCGG
CACCTGCGCT TCAACCTGAC CGGCTTCTAC GTCGACTATA ACGACCTGCA GAAGCAGATC
GTCGTGCCGC TGGTGGTCGG CGGGCAGCAG TTCCAGGTCA CCCGCTTCTT CAACGCCGCC
AAGGCGACGG TGAAGGGCAT CGAGCTGGAA AGCACGCTGA TCCCGGTGCA CGGCCTCACC
CTGCGCGGCC TGGTCGGCTA TCAGGACGGC AAGTATAAGA GCTACGTCAC GCCGATCCCG
GCGGGCTACG ACCTGTCGAC CGCGCCGCTC GACCGCCTGC CCAAGTGGCA GTGGACGGCG
GATGCGACCT ACGAGCTGCC GATCGGCGAC TTCAAGCTGC AGTTCAACGG CAACATCAAC
TATGTCGCCC GCAACCTGTT CACCCAGTCG ATCACCAGCC CGGCGGAGAA CACCTTCCTC
AACGCCCGGA CGCTGTACAA CGCGTCGATC ACGCTGATGC AGGCCGACGA CAAATATTAT
GTCCGCCTGA TCGGCCGCAA CCTCAGCGAC AAGCGCTACC TGACCGGCGC GCAGGTGGTC
GGCGGCCTCT GGGCCAACGG CCAGTACGGC CCGCCGCGCT ACTTCGGCGC GGAACTGGGG
TTCAAGCTCG GCAACTGA
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| Protein sequence | MLKRHWYVGS ACAALAAALT AVPALAQSAP AETAETASDG GLQEIVVTAT RRDSNLQSTA
IAISAVDENL IRQASPRNVG DLAAFVPNFS AATITNFNAA SFSIRGVGQN SIIVYFEPPV
AVLVDDFVMP SVQTQLLDTF DVSQVEVLRG PQGTLFGKNT TGGAVVVKTK RPQLEKIEVE
GRLQVGDFGT VIPQASFNLP IGQTLAFRGV IGHTQSDGYY KNGGCFGPVT PFAATAFAAK
FAGQSGCGDG RSLGGQDVWN ARAKLLWEPS DAFSALLQYE YLRDRSDSVP SVNLTPASNG
FLFHSLGLGS VPNRNSDPLK NAALTDRQAA LIKEKSGQIV NVDGVYLNMD YKTDWGTFTS
VSGYRNQRSR LPNTYMGTAP VASDGTVLSL FDAQRDDNRK TYQQELRFAS SFDGPFNFVA
GGFYQKDKTS FCVAQLLGFL DLASGGPGFG NWNDNPYLLC NAQRSRSKAT FVEGTFKFTP
TLTLTGGFRY TWENKSWYGR QQVFAQQLEG GFDPSIVLEN ALDANVFDYT AGVIKVKDSA
REPTWRVSLG WQATPTVFAY ATYSRGFKAG GFNDQIGSFH PFVNADGSDN PAAFAAAASA
TKPERADSYE AGVKTELFDR HLRFNLTGFY VDYNDLQKQI VVPLVVGGQQ FQVTRFFNAA
KATVKGIELE STLIPVHGLT LRGLVGYQDG KYKSYVTPIP AGYDLSTAPL DRLPKWQWTA
DATYELPIGD FKLQFNGNIN YVARNLFTQS ITSPAENTFL NARTLYNASI TLMQADDKYY
VRLIGRNLSD KRYLTGAQVV GGLWANGQYG PPRYFGAELG FKLGN
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