Gene Swit_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2249 
Symbol 
ID5200956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2505945 
End bp2506460 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content69% 
IMG OID640581795 
Productdehydratase 
Protein accessionYP_001262746 
Protein GI148555164 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.579466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.226342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC ATGATGCCCC CTTCGTCCCC GCCCGGCCGA CCCGCTGCTT CGAGGACCTC 
GTGATCGGCG AGGTCCGCCG GTCCGAGCCG CGCCTCGTCA CCGAGGCGGA GATACTCGCC
TTCGCGCGCC AATGGGACCC GCAATGGTTC CACAGCGACG CCGACCTCGC CCGCCAGTCG
GTGTTCGGGG AGGTCGTCGC CAGCGGCATC CACACCCTCG CGCTGTGGCG GCAGATGGAT
CATGCGATCA ATGCCGACAT CGACTTCGTC TGCGGCATCG GCTGGGACGA GGTGCGGATG
AAGAAGGCCG TCCGCGCCGG CGACAGCATC CACGTCACCT CCGAGATCGT CGAGCTGCGC
CCCTCGACCT CGCGCGCCGA TCGTGGCACC GCCATCACCC GCTATGCCGT CGTCAACCAG
CATGGCGAGG AGGCGGTGAG CTTCCGCAGC ATCAACCTGG TCTATACCCG CGCCGGCAGG
GAGAGGCCGG AGAGCAGCGC GTCGACCTCG GCATAG
 
Protein sequence
MSDHDAPFVP ARPTRCFEDL VIGEVRRSEP RLVTEAEILA FARQWDPQWF HSDADLARQS 
VFGEVVASGI HTLALWRQMD HAINADIDFV CGIGWDEVRM KKAVRAGDSI HVTSEIVELR
PSTSRADRGT AITRYAVVNQ HGEEAVSFRS INLVYTRAGR ERPESSASTS A