Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2249 |
Symbol | |
ID | 5200956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2505945 |
End bp | 2506460 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640581795 |
Product | dehydratase |
Protein accession | YP_001262746 |
Protein GI | 148555164 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.579466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.226342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGACC ATGATGCCCC CTTCGTCCCC GCCCGGCCGA CCCGCTGCTT CGAGGACCTC GTGATCGGCG AGGTCCGCCG GTCCGAGCCG CGCCTCGTCA CCGAGGCGGA GATACTCGCC TTCGCGCGCC AATGGGACCC GCAATGGTTC CACAGCGACG CCGACCTCGC CCGCCAGTCG GTGTTCGGGG AGGTCGTCGC CAGCGGCATC CACACCCTCG CGCTGTGGCG GCAGATGGAT CATGCGATCA ATGCCGACAT CGACTTCGTC TGCGGCATCG GCTGGGACGA GGTGCGGATG AAGAAGGCCG TCCGCGCCGG CGACAGCATC CACGTCACCT CCGAGATCGT CGAGCTGCGC CCCTCGACCT CGCGCGCCGA TCGTGGCACC GCCATCACCC GCTATGCCGT CGTCAACCAG CATGGCGAGG AGGCGGTGAG CTTCCGCAGC ATCAACCTGG TCTATACCCG CGCCGGCAGG GAGAGGCCGG AGAGCAGCGC GTCGACCTCG GCATAG
|
Protein sequence | MSDHDAPFVP ARPTRCFEDL VIGEVRRSEP RLVTEAEILA FARQWDPQWF HSDADLARQS VFGEVVASGI HTLALWRQMD HAINADIDFV CGIGWDEVRM KKAVRAGDSI HVTSEIVELR PSTSRADRGT AITRYAVVNQ HGEEAVSFRS INLVYTRAGR ERPESSASTS A
|
| |