Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2240 |
Symbol | |
ID | 5199126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2496385 |
End bp | 2498472 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640581786 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001262737 |
Protein GI | 148555155 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.778513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCA GGAACCGCAT GCTGGCCGGG CTGCTCGGCA CCGCCTGCCT GTTCGCGGCG AGCGCCGCCG TGGCGCAGGA GGCCGCCGCC GGCGCCGATC CCGCCGAGGG CAACGACATC GTCGTCACCG CGCGGCAGCG CTCGGAGAGC CTGCAGCAGG TGCCCGATTC GGTCACCGCC TTCTCCGCCA GGACGATCGA GGAGGCGGGC ATCCGCAGCA TCGACGACGT CACCGCGCTG ATGCCGAACA TCTCGCTGGT CGATTCGCAG GACGCCGGCA CGGTCGCGAT CAACATCCGG GGCATCGGAC AGGTCCGCAA CGGCGAGGCG CCGGTCGCGC TCGTCATCGA CGGGGTCCAG ATGACCTCGA CCGACATGAT CAAGCAGGCG CTGCTCGACC TCGACCAGAT CGAGGTGCTG AAGGGGCCGC AGGGCGCGCT CTACGGCCGC AACGCGATCG GCGGCGCGAT CAACATCACC ACGAAGCGGC CGACCAACGA CCTGCAGGGC CGCGTCTCGG TCGACTATGC CAATGGCGAC GACCGCCGCC TGTCGGGAAC GCTGAGCGGC GCGCTGGTGC CCGACCGGCT GCTGTTCCGC ATCGCCGGCG ACTATCGCAA GTTCGACGGC GTCTTCCGCA ACGTCACGCT CGACCGGAAG GTCGACTTCG TCGAGGACCT CAACCTGCGC GGCCGGCTGA TCTTCACGCC GACCGAGCGG CTGACGATCG ACCTGCGCGG CGCCTATGGC GACCTCAAGG CGGGCGCCTC CTGGTACATC CCGCTGCCCG ACGGCCAGCC GAACGACAGC AGCGTGCCGA TCCAGAACGA TTTCCTGGGC CGCAGTCCGC GCACGGTGAA GGACGGGTCG CTCAAGGTCG ACTATGAATT CGATCCCTTC ACGCTGAGCT CGATCAGCGC GTTCAACACC ACCCGGATCG ACCTGAGCGA GGACCTCGAC TGGTTCCCGC AGTCGATCCT CGGCGCGACC CAGCTCCGCC GCTACGAGAG CTTCACCCAG GAATTCCGCC TGGCTTCCCC CTCGACGCAG AGGCTGCGCT GGACGGCGGG CGCCTATCTG CTCGACGCGC GGCGGCGGGT CGACACGGTC GTCCTGATCT CGCCCGATCC GACCGCGTCG AAGCTGCCGC CCTCGGCCTA TATCCCGCTG CCGGCGGCGC GCGCGACCGA GGACATCCTG ACCAAGGCCG CCTATGCCCA GCTCAACTAC AGCGTCACCG ACACGGTCGA GCTGACCGGC GCGTTGCGCT ACGACCATGA CCGGCGCGAA CAGACCAACC GGCTCGTGCC GGGGCCGAAG CGCAAGGCCA ATTTCGACGA ATGGCAGCCG AAGGTCTCGA TCAAATATTC GCCGACCCCC GACACCATGA TCTACGCGAC GGCGGCGCGC GGCTTCCGCA GCGGCGGCTT CAATCCGCCC AACGCGGTCT TCCCCGCCAT CTACAAGCCC GAGGTCGCCG ACACGCTGGA GATCGGCAGC AAGAACAGCC TGCTCGACCG CCGGCTGACG CTCAACGCCG CCGCCTTCTA CATGCGCTAC AAGGACCAGC AGGTCTTCAT CCTCAACGTC GCCGACCAGG GCATCGTCAA CGTCGGCAAG ACCGACATCT ACGGCTTCGA ACTGGAGGCG CAGGCGCGGC CGGTCCGTAA CCTCCAGCTC GGCGCGTCGC TCGGCTTCAT CGACACGAAG ATCAAGGATT TCGACGGCAC CGCGCGGTTC CGCGGCAACC GGGTGCCGCT CACCTATCGC TGGTCCTATA CCGCGTTCGG CCAGTATCGG GTGCCGGTCG GCGGCGATCG CGGCATCGTC GCCCGCGTCG ACTATTCGGG CCGGTCGGGC AATTACTGGC ACATCGACAA TGCCGACCGG CAGGACGCGG TCCACCTCGT CAATGCCCGG CTGACCTTCG ACGCGAAGCG CTACTCGATC GCGCTCTATG CCACCAACCT GTTCAAGGAG CGCTACACCG AGGAGTTCTT CGCCAAGGAA TTCTCGGCCG GCGCCGCCGA CATCCGCTAT CCGGGCCAGC CGCGCCGCTA CGGCGTCTCG GCGACCCTCA ACTTCTGA
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Protein sequence | MTFRNRMLAG LLGTACLFAA SAAVAQEAAA GADPAEGNDI VVTARQRSES LQQVPDSVTA FSARTIEEAG IRSIDDVTAL MPNISLVDSQ DAGTVAINIR GIGQVRNGEA PVALVIDGVQ MTSTDMIKQA LLDLDQIEVL KGPQGALYGR NAIGGAINIT TKRPTNDLQG RVSVDYANGD DRRLSGTLSG ALVPDRLLFR IAGDYRKFDG VFRNVTLDRK VDFVEDLNLR GRLIFTPTER LTIDLRGAYG DLKAGASWYI PLPDGQPNDS SVPIQNDFLG RSPRTVKDGS LKVDYEFDPF TLSSISAFNT TRIDLSEDLD WFPQSILGAT QLRRYESFTQ EFRLASPSTQ RLRWTAGAYL LDARRRVDTV VLISPDPTAS KLPPSAYIPL PAARATEDIL TKAAYAQLNY SVTDTVELTG ALRYDHDRRE QTNRLVPGPK RKANFDEWQP KVSIKYSPTP DTMIYATAAR GFRSGGFNPP NAVFPAIYKP EVADTLEIGS KNSLLDRRLT LNAAAFYMRY KDQQVFILNV ADQGIVNVGK TDIYGFELEA QARPVRNLQL GASLGFIDTK IKDFDGTARF RGNRVPLTYR WSYTAFGQYR VPVGGDRGIV ARVDYSGRSG NYWHIDNADR QDAVHLVNAR LTFDAKRYSI ALYATNLFKE RYTEEFFAKE FSAGAADIRY PGQPRRYGVS ATLNF
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