| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2232 |
|---|
| Symbol | |
|---|
| ID | 5198549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2488151 |
|---|
| End bp | 2489668 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640581778 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_001262729 |
|---|
| Protein GI | 148555147 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCGG CGCGCCTCGC CTCGCTCTTC CCGGTCACCT TCTCGCGCGA CTTCACGGCG
TCGATCGTCG TGTTCCTGGT CGCGCTGCCG CTCTGCATGG GCATCGCGGT GGCGTCGGGC
GTGCCGCCCG AAAAGGGCCT GATCACGGGC ATCATCGGCG GCCTCGTCGT CGGCGCGCTC
GCCGGATCGC CGCTGCAGGT CAGCGGCCCG GCGGCGGGCC TCGCCGTCAT CGTGTTCGAA
CTGGTCCGCG ACCATGGCCT GTCGGCGCTC GGCCCGATCC TCGCGCTCGC GGGCGCGATC
CAGCTCGTCG CCGGCGTGCT CAAGCTGGGC GGCTGGTTCC GCGCCATCTC CCCGGCGGTC
GTCCATGGCA TGCTGGCGGG GATCGGCGCG CTGATCGTCG TCGGCCAGTT CCACGTCCTG
TTCGACGCCA AGCCGCTGCC CAACGGCCTC CAGAACCTCG CGGCGATGCC GGCGCGGCTG
TTCGGCCTGT CGGCCTCGAA CGTCGCCGCG GCCGAAATGG CCTTCGCGAT CGGTCTGGTC
ACGATCGTCG CGATGCTGAT GTGGGAGAAG CTGCGGCCGG CGACGATGAA GCTGGTGCCG
GGCGCGCTGG TCGGCGTCCT CGCCGGCACG CTGGTCGCCT GGGGCCTCGG CCTGTCGATC
ACCCGGGTCG AGGTGCCGTC CTCGATCGTC GCCGCGATCG CGCCGCCGGA TGCCGGCTTC
CTCGGCCAGA TGCTCGATCC CGCGCTGCTG GTGACGGCGG TCGCGATCGC CTTCATCGCC
AGCGCCGAGA CGCTGCTGTC GGCGGCGGCG GTCGACCGGA TGCATGACGG CGTCCGCACC
GATTACGACA AGGAGCTGCG CGCCCAGGGC GTCGGCAACC TGCTGTGCGG CTTCGCGGGC
GCGCTGCCGA TGACCGGCGT CATCGTCCGC AGCTCGGCCA ATGTCCAGGC GGGCGCGGTG
ACGCGGCTGT CGGCGGTGCT CCACGGCGCC TGGCTGCTGG CCTTCGTCGC GCTGCTGCCC
TGGCTGCTGC GGGAGATCCC GATGGCCTCG CTCGCCGGCA TCCTGGTCGT CACCGGCTGG
CGGCTGGTGT CGGTGGCGCA CGTCCGCCAC CTGTTCCACC ATCATGGCGT ACTGCCGGTG
GTGATCTGGG TGGCGACCTT CGTGATGGTG GTGGCGACCG ACCTGCTGAC CGGCGTGCTC
GTCGGCCTCG GCCTCTCGCT GCTCGAGCTG GTCCCGCACC TGCGGCGGCT GCGGCTGCGG
GTCGACGCGA ATCACGGCGA CGAGCAGAGC GAGATCCGGC TCGAGGGAGC GGCGACCTTC
CTGACGCTGC CGAAGCTCCT CAAGGCGCTC GAATCGATCC CCGGCGGCCG CGCGGTCAGC
CTCGACATCC GCAAGGTGCC GGCGATCGAC CACAGTTCGG CGGAGATGCT GGGCGAATGG
ATCCAGCGCC GCCGGTCCGG AGGGACGCGG GTCGACCTCG ACGCCGGGGA CGACCAGCTC
CGCAAGATCG CAGCCTGA
|
|---|
| Protein sequence | MISARLASLF PVTFSRDFTA SIVVFLVALP LCMGIAVASG VPPEKGLITG IIGGLVVGAL
AGSPLQVSGP AAGLAVIVFE LVRDHGLSAL GPILALAGAI QLVAGVLKLG GWFRAISPAV
VHGMLAGIGA LIVVGQFHVL FDAKPLPNGL QNLAAMPARL FGLSASNVAA AEMAFAIGLV
TIVAMLMWEK LRPATMKLVP GALVGVLAGT LVAWGLGLSI TRVEVPSSIV AAIAPPDAGF
LGQMLDPALL VTAVAIAFIA SAETLLSAAA VDRMHDGVRT DYDKELRAQG VGNLLCGFAG
ALPMTGVIVR SSANVQAGAV TRLSAVLHGA WLLAFVALLP WLLREIPMAS LAGILVVTGW
RLVSVAHVRH LFHHHGVLPV VIWVATFVMV VATDLLTGVL VGLGLSLLEL VPHLRRLRLR
VDANHGDEQS EIRLEGAATF LTLPKLLKAL ESIPGGRAVS LDIRKVPAID HSSAEMLGEW
IQRRRSGGTR VDLDAGDDQL RKIAA
|
|---|
| |