| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2226 |
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| Symbol | |
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| ID | 5199963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2480066 |
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| End bp | 2482423 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581772 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001262723 |
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| Protein GI | 148555141 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.393285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGAA GATTCCTGCG CGACCTTCAA AAGGGGACCG AATTGATGCA GCCCACCTTC
GCCAAGTCCA TTTCCCTGCC CGCCCTGCTG GCGATCACCG TCTCTGCCGT CGCGCTCGCC
GCGCCGGCCC GCGCGCAGGA CGGCGTCGCG GCCGACGGCG ACGGCGGCGA CATCGTCGTC
ACCGCCCGCA AGGCGCGCGA GCGCCTCCAG GACGTTCCGA TCTCGGTCAA CGCGCTGTCC
GGCGACCAGC TCCGCGATCG CGGAGCGGTC GACGTCAAGG ACGTGCTGCG CAGCGTCCCC
GGCCTGTCCT TCTCGGGCAC CGAGCGCGGC CTCGGCAACT ACAACATCCG CGGCATCAGC
ACCGTCGCCT CGGCGCCGAC GGTCGGCATC TATCTCGACG ACATCTCGCT CGTCACCATC
GCCACCTCGT TCAGCGGCGC CTTCGACCCG GTGTTCTTCG ACATGGAGCG GCTGGAGGTG
CTGAAGGGCC CGCAGGGCAC GCTCTACGGC GGCAGTTCGA TGGGCGGCGC GATCAAATAT
GTCAGCGCCC GGCCGAAGCT GAACGTGATC GAAGGCAGCG TCGCCGCCGG GATCGGCACC
ACCGCGCACG GCACCGCCTC CTATAATGCG GAGGCGGTGC TCAACCTGCC GCTCGTCGCC
GACAAGCTGT CGGTGCGCGG CGGCGTCTTC TATCGCCACG ACGGCGGCTA TGTGGACAAT
GTCGCCGCCG GCACCGTCAC CAACTCGCGC TATTCGAGCA CGGCCCCCGG CTACACGCCG
CAGGCGCAGC CGTCGCTGAG CACCCGCAAC CAGGCCAACT ACAACGACGC CGACACCTAT
GTCGGCCGCC TGTCGCTGCT GTGGCAGCCC GACGAGAGCT GGTCGATCCG GCCGGCCGCC
TTCTACCAGC ACTACAAGCT CGCCAATCCC GGCCAGTTCT TCCTCGGCAT GCCCGAGCTG
ACCGCTTCCT ACCGGATCAA GCAGCCGACC ACCGACAAGG CGGGCATCTA CAGCCTGGCG
ATCGACAAGG AGCTGGGCGC GGTCCAGGCG ACCTCGCTGA CCGCCTATTT CGACCGCAAG
CTCGATTTCG TCCGCGACTA CAGCTATTTC ATCGGCGGGC TGGTGCCGCC GCTCTACCCG
CTGACCAGCC GCAACCTGTC GGCCAGCCGC ACCAAGACCT TCAGCCAGGA GCTGCGCCTC
GCCTCGAACG ATCCCGGCGC GCGGCTGACC TGGATCGCGG GCCTCTATTA TTCGCACCAG
GACGACCGGC TCTACCAGAT CGCGGTCACC CCCGGCGCCA CCCCGGTGAT CGGCACCGAG
GTCGGCTATG TCGGCGACAC CACCACCATC ACCAAGCAAT ATGCCGCCTT CGGCGAGGCG
ACCTACAAGC TGCTCGACAA TCTCGACATC ACCGCCGGCG TGCGGCTGTT CCAGATCAAG
CAGATCGTCG ACATCCTCGG CGACGGCCCG TTCAACGGCG GCCTGACCCA GATCGTCGGA
CGCAAGAGCA ACGAGAAGGG CGTCAATCCG AAGGTCGGCA TCTCCTACAA GGTGACGCGC
GACAACCTGA TCTACGCCTC GGCGGCGAAG GGCTTCCGCC CCGGCGGCCC GAACCGCTTC
CAGATCAACC CGGCGCTGTG CGCCACCGAC CTCGCCCGGC TGGGCCTGAC GGCGGCGCCC
AACACCTTCG ATTCGGACAA TCTGTGGAGC TATGAGCTGG GCACCAAGAA CCAGTTCGGC
AGCAGCGTCC TGGTCAACGC CGCGCTGTTC TACACCGACT GGAAGAAGAT CCAGCAGCAG
ATCAATCTGT CGAGCTGCGG CTTCGCCTTC ACCGGCAATG CCGGCAGCGC CGACGTCAAG
GGCGCCGAGC TGGAGACCCG GTTCAACCTG ACCCGCGCGT TCCAGGTCGG CGGCACCGCG
ACCTACAGCG ACGCCAAGAT CTCCACCGCC GCGCTCGGCA CCAGCGCGCA GGACGGGGAC
CAGGTGCTCG CCGTGCCGAA ATGGATGCTG AGCGGCTTCG CCAGCTACAG CGTCGAGGTG
GCCGACGGCT GGCGCGGGCA GATCCGCGGC GAATATCAGT ATCAGAGCCG CTCGCGCCGC
CAGTTCGACC GGATCCAGTC GGTGGTCTTC CCCGGCGGCG TGCCCGGCAC GGCGCCCAAC
CGCGCCGAGT TCCGCCAGGG CTATCAGGTG GTCAATGCCT TCGCCTCGGT CGGCGACGGC
GAGACCGAGG TCCGCCTCTA CCTCAACAAT GTCTTCGACG TGGCGCCGCG GCTCGACACC
GACCTGACCG GCGGATCGGA CCGTTCGACG ACGATCCGGC CGCGCACCGT CGGCCTCGAA
GTCCGGCGGC GCTTCTAA
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| Protein sequence | MDRRFLRDLQ KGTELMQPTF AKSISLPALL AITVSAVALA APARAQDGVA ADGDGGDIVV
TARKARERLQ DVPISVNALS GDQLRDRGAV DVKDVLRSVP GLSFSGTERG LGNYNIRGIS
TVASAPTVGI YLDDISLVTI ATSFSGAFDP VFFDMERLEV LKGPQGTLYG GSSMGGAIKY
VSARPKLNVI EGSVAAGIGT TAHGTASYNA EAVLNLPLVA DKLSVRGGVF YRHDGGYVDN
VAAGTVTNSR YSSTAPGYTP QAQPSLSTRN QANYNDADTY VGRLSLLWQP DESWSIRPAA
FYQHYKLANP GQFFLGMPEL TASYRIKQPT TDKAGIYSLA IDKELGAVQA TSLTAYFDRK
LDFVRDYSYF IGGLVPPLYP LTSRNLSASR TKTFSQELRL ASNDPGARLT WIAGLYYSHQ
DDRLYQIAVT PGATPVIGTE VGYVGDTTTI TKQYAAFGEA TYKLLDNLDI TAGVRLFQIK
QIVDILGDGP FNGGLTQIVG RKSNEKGVNP KVGISYKVTR DNLIYASAAK GFRPGGPNRF
QINPALCATD LARLGLTAAP NTFDSDNLWS YELGTKNQFG SSVLVNAALF YTDWKKIQQQ
INLSSCGFAF TGNAGSADVK GAELETRFNL TRAFQVGGTA TYSDAKISTA ALGTSAQDGD
QVLAVPKWML SGFASYSVEV ADGWRGQIRG EYQYQSRSRR QFDRIQSVVF PGGVPGTAPN
RAEFRQGYQV VNAFASVGDG ETEVRLYLNN VFDVAPRLDT DLTGGSDRST TIRPRTVGLE
VRRRF
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