| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2225 |
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| Symbol | |
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| ID | 5199962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2478870 |
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| End bp | 2479883 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640581771 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001262722 |
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| Protein GI | 148555140 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.120601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.705003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGACA GTCCGATCCG CGATCATGGC GCCATCGATC CGACGCTCGG GTTGATGCTC
GATGACGATG CCCGGACATT CCTGGCCGGC CTGGCGCCCG ATCCGCTGTC CGGCGCCCGG
CGCATGCCGC GGATGCGGCC GTCCGACGCG GAGGCGTCGG GCTGGTTCCA GGGCATGACC
GTCCGGCCGG GCTTCTCCTT CGTGATGACC GACGTCTATC GGGCGCGGAG CAAGGAGGCG
ATGTTCGTCA GCGACGATCA TCTGAAGCTG CACTTCAAGC TCGACGGGCC GAGCGCGATC
AGCGGCGCCA GCCGGGAGAA CATGACCGTC GAGCCCGGCG TGATGGCCTT CCTGGTCCAG
CCGCCGCGCA CGGTGAAATA TGAGACCGTG CGCGAGGATG CGCGGATGCG CTGCATCACC
ATGGTGTGCA GCCGCGAATT CGCCGGGCAG TTCCTGTCGC CCGTCGACGG CGACCTGCCG
GCGCCGATCG TCGAATATCT CAAGGGCCCG GTCTCGCGCT TCGCCCATGG CTATATCCCG
CTGCCGCCGC AACTCCGCGC GCTGGTCGAG GAGATGATGG CCCTGCAAGG CGATTCGCTC
GGCCAGCTCA TGCTGGAGGC CAAGGCGCTC GAGCTGCTCT ACCTGGCGCT CCGGCAATTG
TCGGGGACCA GCGCCGCCGC CCCGCGCGAG CGCGATCGCC GCAAGGTCCA GCAATTATGC
GCGCTGCTCG ACAGCAAGGA AGGCGGCGCG ATGAACATCG CCCAGCTCTG CCGCGAGATC
GCCTGGAACG AGACCCAGAT GATGGAGAGC TTCAAGCAGA TCACCGGCAC GACGATCGCC
AGCTATCGCC AGCGGCAGCG CATGGAGCAG GCGCTGCGCC AGCTCCGCAC CACCGAGCTG
TCGATCACCG AGATCGCGTT CGACGCCGGC TACGAGCATC CCAGCAATTT CGCCACGGCG
TTCAAGCGGA CCTTCGGCTT CTCCCCGCGG GCCGGGCGCG CCAGCCTGAA CTGA
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| Protein sequence | MNDSPIRDHG AIDPTLGLML DDDARTFLAG LAPDPLSGAR RMPRMRPSDA EASGWFQGMT
VRPGFSFVMT DVYRARSKEA MFVSDDHLKL HFKLDGPSAI SGASRENMTV EPGVMAFLVQ
PPRTVKYETV REDARMRCIT MVCSREFAGQ FLSPVDGDLP APIVEYLKGP VSRFAHGYIP
LPPQLRALVE EMMALQGDSL GQLMLEAKAL ELLYLALRQL SGTSAAAPRE RDRRKVQQLC
ALLDSKEGGA MNIAQLCREI AWNETQMMES FKQITGTTIA SYRQRQRMEQ ALRQLRTTEL
SITEIAFDAG YEHPSNFATA FKRTFGFSPR AGRASLN
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