| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2199 |
|---|
| Symbol | |
|---|
| ID | 5199878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2461256 |
|---|
| End bp | 2462122 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640581744 |
|---|
| Product | D12 class N6 adenine-specific DNA methyltransferase |
|---|
| Protein accession | YP_001262696 |
|---|
| Protein GI | 148555114 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0338] Site-specific DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00608262 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCGC ATGCATCGAT CCCGCCGGCG GTGCCCCGGC CGCTGCTGCG CTGGCTGGGC
GGTAAGTTCC GCCTCGCTCC CTGGATCATC GAGCATTTCC CGCCGCACCG CATCTATGTC
GAGCCGTTCG GCGGCGCGGC ATCGGTGCTG TTGCAGAAGC CGCGCGCCTA TAACGAGATC
TACAACGATC TCGACGGCGA GTTGGTGAAC CTGTTCCGGG TGCTGCGCAG CGATGCGGCC
GAGGCACTGA TCGAGGCCGT TCGGCTGACC CCCTATGCGC GGGCGGATTA TCTGCTGGCT
TACGAGCCGT GCGAGGATGT CGTCGAGCGC GCGCGGCGCA TGATCGTGCG GTCGCATATG
GGGCACGGCA CCGGCGGCGC GCGGATCGAT CGTCCGTCCG GCTTTCGATC GGACGGCATC
AGCGGCACGA CGAATGTCGC GGGGGAATGG GCAGACCTGC CGGGCGCGCT GGCCGCGATC
GTCGACCGGC TCCGGGGCGT CTCCATCGAC TGCCGGCCGG CGCTGGAGCT GATCGCTGTC
TATGACGATC CGAAGGCGCT GATCTACCTC GACCCGCCTT ATGTCCCCGA GACACGCTCG
ACCAAGTCGC GCCGGCCGGG CGAGAAATAC CATACCTATG CCCACGAACT GACCGTGGAC
GATCATGTCG AGCTGCTGGA CGCCGCCTGC GCGTCGCGGG CGATGATAGT GATCTCGGGC
TATCCGGCCG GGCTGTACGA CCAGCGCCTG CAGGGCTGGC GCCGGGTGGA GCGCGCGGCG
CGGGCGCACC GAAATTCGCC GCGAACCGAA GTCCTCTGGA TCAATCCGCT CGCGGCCGAT
CGGCTCGGGC CTGGTCAACT GCTGTGA
|
|---|
| Protein sequence | MNAHASIPPA VPRPLLRWLG GKFRLAPWII EHFPPHRIYV EPFGGAASVL LQKPRAYNEI
YNDLDGELVN LFRVLRSDAA EALIEAVRLT PYARADYLLA YEPCEDVVER ARRMIVRSHM
GHGTGGARID RPSGFRSDGI SGTTNVAGEW ADLPGALAAI VDRLRGVSID CRPALELIAV
YDDPKALIYL DPPYVPETRS TKSRRPGEKY HTYAHELTVD DHVELLDAAC ASRAMIVISG
YPAGLYDQRL QGWRRVERAA RAHRNSPRTE VLWINPLAAD RLGPGQLL
|
|---|
| |