Gene Swit_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2153 
Symbol 
ID5197852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2414594 
End bp2415571 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content71% 
IMG OID640581698 
Producthypothetical protein 
Protein accessionYP_001262650 
Protein GI148555068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGGA AGCTTCCCGT AATCAAGGGC CTGGCCGCGC TGTTCGCCGC CGGCCTGATC 
GCCGTCCCGG GCGCCGCCAC CACCGGCGAT CCCGCGCCGT CGGCCCCGGA GACGATCCAG
GGCAACCGCG ACATCAACAA GCGGCTGACC GTGCCGGTGA CGATCGACGG CGGCGGCACC
TACCAGTTCG TCGTCGACAC CGGGGCCGAG CGCACCGTGC TCTCGCGCGA GCTGGCCGAG
CGGCTGACCC TCGTGCCGGC AGCCCCCGTC ACCCTGCTCA GCATCGCCGG GGAGGACCAG
GTCGCGACGG CGATCGTGCC CGGCCTCCAC CTCACGGCGA GCCGCAGCCG CATGGAGGCG
TTCGAGGCGC CGCTGCTCTC CGAATTCCAC CTCGGCGCGG TCGGCATGCT CGGCATCGAC
AGCCTGCAGA CCAAGCGGGT CGTGCTCGAT TTCCGGGCGA TGCGCATGTC GATCAGCGAG
GCGCCCCGCT CGACCCGCGT CGCGACCGAC GAGATCGTCG TCACCGCGCG CCGCCGGCTC
GGCCAGCTCA TCCTCGTCGA TGCCGAGGCC GAGGGGCAGA AGGTCAACGT CATCATCGAC
ACCGGATCGG CGGTGTCGAT CGGCAATCCG GCGCTGCGCG AGCGGCTCGA ACGGCGCAAG
CGGCTCGGCC CGGTCGTGCC GATCAGCATC ACCAGCGTCA CCGGCGGGCA GACCCCGGCC
GACTATAGCT CGGTCCACGA GATCCGGATC GGCGGAGTCA CGCTGAAGGA CATGCCGATC
GCCTTTGCCG ACGCGCAGAT CTTCCACCGG CTCGGCCTCG ACAACCGTCC GTCGGTGCTG
CTCGGCATGG ACGCGCTGCG GCTGTTCGAC CGGGTGTCGA TCGATTTCGC CAACCGCAAC
GTCCGCTTCC TGATGCCGGG CGACGCCTGG CAGGTGGCGC CGCCCCAGCT GGCGGGGATG
GTCCCGCACC GGGGCTGA
 
Protein sequence
MERKLPVIKG LAALFAAGLI AVPGAATTGD PAPSAPETIQ GNRDINKRLT VPVTIDGGGT 
YQFVVDTGAE RTVLSRELAE RLTLVPAAPV TLLSIAGEDQ VATAIVPGLH LTASRSRMEA
FEAPLLSEFH LGAVGMLGID SLQTKRVVLD FRAMRMSISE APRSTRVATD EIVVTARRRL
GQLILVDAEA EGQKVNVIID TGSAVSIGNP ALRERLERRK RLGPVVPISI TSVTGGQTPA
DYSSVHEIRI GGVTLKDMPI AFADAQIFHR LGLDNRPSVL LGMDALRLFD RVSIDFANRN
VRFLMPGDAW QVAPPQLAGM VPHRG